.的完整叶绿体基因组序列的组装与系统发育分析
Assembly and phylogenetic analysis of the complete chloroplast genome sequence of .
作者信息
Lin Haifeng, Jiang Ling, Zhang Fuquan, Bai Di
机构信息
College of Information Science and Technology, Nanjing Forestry University, Nanjing, Jiangsu, China.
School of Civil Engineering, Nanjing Forestry University, Nanjing, Jiangsu, China.
出版信息
Mitochondrial DNA B Resour. 2019 Oct 21;4(2):3679-3680. doi: 10.1080/23802359.2019.1678423.
The complete chloroplast (cp) genome sequence of () was sequenced and assembled into a circular genome of 156,728 bp length using Illumina paired-end data. The cp genome composed of a pair of 24,090 bp inverted repeat (IR) regions separated by a large single copy region (LSC) of 88,256 bp and a small single copy region (SSC) of 20,292 bp. Additionally, a total of 131 genes, including 85 protein-coding genes, 38 tRNA genes and 8 rRNA genes, were identified in the cp genome. Phylogenetic analysis showed that was evolutionarily close to other two kiwifruits and .
使用Illumina双端数据对（）的完整叶绿体（cp）基因组序列进行了测序，并组装成一个长度为156,728 bp的环状基因组。该cp基因组由一对24,090 bp的反向重复（IR）区域组成，中间被一个88,256 bp的大单拷贝区域（LSC）和一个20,292 bp的小单拷贝区域（SSC）隔开。此外，在该cp基因组中总共鉴定出131个基因，包括85个蛋白质编码基因、38个tRNA基因和8个rRNA基因。系统发育分析表明，（）在进化上与其他两种猕猴桃（）和（）相近。
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