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猕猴桃科(Actinidiaceae)叶绿体全基因组的特征分析与系统发育分析

Characterization and phylogenetic analysis of the complete chloroplast genome of (Actinidiaceae).

作者信息

Yang Aihong, Hu Miao, Liu Tengyun, Liu Shujuan, Zhou Hua, Yu Faxin

机构信息

The Key Laboratory of Horticultural Plant Genetic and Improvement of Jiangxi Province, Institute of Biological Resources, Jiangxi Academy of Sciences, Nanchang, China.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 1;6(2):672-673. doi: 10.1080/23802359.2021.1881838.

Abstract

The complete chloroplast (cp) genome of was sequenced and assembled using Illumina pair-end sequencing data. The cp genome is 157,021 bp in length and comprises a large single copy (LSC) region of 88,557 bp and a small single copy (SSC) region of 21,562 bp separated by two inverted repeat (IR) regions of 23,451 bp. A total of 113 unique genes were identified, including 79 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis based on cp genomes of 20 Actinidiaceae species revealed that was evolutionarily close to , , and

摘要

利用Illumina双端测序数据对[物种名称]的完整叶绿体(cp)基因组进行了测序和组装。该cp基因组长度为157,021 bp,包括一个88,557 bp的大单拷贝(LSC)区域和一个21,562 bp的小单拷贝(SSC)区域,这两个区域被两个23,451 bp的反向重复(IR)区域隔开。共鉴定出113个独特基因,包括79个蛋白质编码基因、30个tRNA基因和4个rRNA基因。基于20种猕猴桃科物种cp基因组的系统发育分析表明,[物种名称]在进化上与[其他物种名称]、[其他物种名称]和[其他物种名称]相近。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fd40/7928189/a1e19d004dba/TMDN_A_1881838_F0001_B.jpg

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