茜草科一种中国民间药用植物的叶绿体全基因组特征分析
Characterization of the complete chloroplast genome of (Rubiaceae): a Chinese folk medicinal plant.
作者信息
Li Zheng-Hui, Ye Ke, Lv Xiao, Zhang Xian, Ling Li-Zhen, Ai Hong-Lian, Zhang Shu-Dong
机构信息
School of Pharmaceutical Sciences, South-Central University for Nationalities, Wuhan, China.
School of Biological Sciences and Technology, Liupanshui Normal University, Liupanshui, China.
出版信息
Mitochondrial DNA B Resour. 2019 Nov 18;4(2):4075-4076. doi: 10.1080/23802359.2019.1691068.
has been used as a traditional medicine in Asian countries to treat jaundice, dysentery, and the pain of rheumatism. The complete chloroplast (cp) genome sequence of was reported and characterized in this study. The cp genome is 153,626 bp in length, composed of a pair of 26,513 bp inverted repeat (IR) regions separated by a large single-copy (LSC) region of 83,712 bp and a small single-copy (SSC) region of 16,888 bp. There were 131 predicted genes (86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes) in the genome, and the overall GC content of the genome is 37.7%. Phylogenetic analysis based on the cp genome data showed that was sister to the clade formed by and .
在亚洲国家，它已被用作传统药物来治疗黄疸、痢疾和风湿疼痛。本研究报道并表征了其完整的叶绿体（cp）基因组序列。该cp基因组长度为153,626 bp，由一对26,513 bp的反向重复（IR）区域组成，这两个区域被一个83,712 bp的大单拷贝（LSC）区域和一个16,888 bp的小单拷贝（SSC）区域隔开。基因组中有131个预测基因（86个蛋白质编码基因、37个tRNA基因和8个rRNA基因），基因组的总体GC含量为37.7%。基于cp基因组数据的系统发育分析表明，它与由[具体物种1]和[具体物种2]形成的分支是姐妹关系。
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