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传统中草药石蒜(Wall.)肖特完整叶绿体基因组的特征分析

Characterization of the complete chloroplast genome of (Wall.) Schott, a traditional Chinese medicinal herb.

作者信息

Zhang Yan, Guo Xiuzhi, Yan Binbin

机构信息

National Resource Center for Chinese Meteria Medica, China Academy of Chinese Medical Sciences, Beijing, PR China.

出版信息

Mitochondrial DNA B Resour. 2020 Aug 12;5(3):3149-3150. doi: 10.1080/23802359.2020.1797577.

Abstract

is a well-known medicinal plant in China. In this study, we sequenced the complete chloroplast (cp) genome sequence of to investigate its phylogenetic relationship in the family Araceae. The cp genome was 167,607 bp in length, consisting of a pair of inverted repeats (IRa and IRb: 26,193 bp) separated by a large single-copy region (LSC: 93,660 bp) and a small single-copy region (SSC: 21,561 bp). The GC content of whole cp genome is 35.3%. assembly and annotation showed the presence of 114 unique genes with 80 protein-coding genes, 30 tRNA genes, and four rRNA genes. Phylogenetic analysis indicated that ens was closely related to , and the genus was sister to the genus .

摘要

是中国一种著名的药用植物。在本研究中,我们对其叶绿体(cp)全基因组序列进行了测序,以研究其在天南星科中的系统发育关系。叶绿体基因组长度为167,607 bp,由一对反向重复序列(IRa和IRb:26,193 bp)组成,中间被一个大单拷贝区域(LSC:93,660 bp)和一个小单拷贝区域(SSC:21,561 bp)隔开。整个叶绿体基因组的GC含量为35.3%。组装和注释显示存在114个独特基因,包括80个蛋白质编码基因、30个tRNA基因和4个rRNA基因。系统发育分析表明,ens与 密切相关, 属是 属的姐妹属。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2574/7782955/cf8af29fe148/TMDN_A_1797577_F0001_C.jpg

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