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.的完整叶绿体基因组序列

The complete chloroplast genome sequence of .

作者信息

Jiang Zhenzhong, Jiao Peng, Qi Zhuo, Qu Jing, Guan Shuyan

机构信息

College of Life Sciences, Jilin Agricultural University, Changchun, China.

College of Agronomy, Jilin Agricultural University, Changchun, China.

出版信息

Mitochondrial DNA B Resour. 2019 Nov 20;4(2):4113-4115. doi: 10.1080/23802359.2019.1692703.

Abstract

is a rare and endangered plant peculiar to China, and a total of 5 plants have been found at present. Based on the next generation sequencing, the whole chloroplast (Cp) genome of (Camellia granthamiana Sealy) of Camellia oleifera was constructed.In this study, the complete chloroplast (cp) genome of was assembled based on next generation sequencing.The cp genome was 157,001 bp in length, including a large single copy (LSC) region of 70,387 bp, a small single copy (SSC) region of 18,296 bp and a pair of inverted repeats (IRs) of 52,082 bp. The genome contained 135 genes, including 90 protein-coding genes, 37 tRNA genes and 8 ribosomal RNA genes. The majority of these gene species occurred as a single copy.

摘要

是中国特有的珍稀濒危植物,目前共发现5株。基于二代测序,构建了油茶(Camellia granthamiana Sealy)的全叶绿体(Cp)基因组。在本研究中,基于二代测序组装了该植物的完整叶绿体(cp)基因组。该cp基因组长度为157,001 bp,包括一个70,387 bp的大单拷贝(LSC)区域、一个18,296 bp的小单拷贝(SSC)区域和一对52,082 bp的反向重复序列(IRs)。该基因组包含135个基因,其中包括90个蛋白质编码基因、37个tRNA基因和8个核糖体RNA基因。这些基因种类中的大多数以单拷贝形式存在。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/054a/7707794/b35488aeb25e/TMDN_A_1692703_F0001_C.jpg

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