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(山茶科)的完整叶绿体基因组。

The complete chloroplast genome of (theaceae).

作者信息

Xiao Xu, Lu Jiangtao, Yang Guoyuan, Li Zhi

机构信息

College of Forestry, Guizhou University, Guiyang, Guizhou Province, China.

Biodiversity and Nature Conservation Research Center, Guizhou University, Guiyang, Guizhou Province, China.

出版信息

Mitochondrial DNA B Resour. 2022 May 2;7(5):735-737. doi: 10.1080/23802359.2022.2068980. eCollection 2022.

DOI:10.1080/23802359.2022.2068980
PMID:35528257
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC9067957/
Abstract

Chang & Y. C. Zhong is a plant belonging to the genus To determine its correct taxonomic status and better understand its molecular phylogenetic and genetic diversity, we studied the chloroplast genome of this species. Here, we report and characterize the complete chloroplast (cp) genome of by using Illumina paired-end sequencing data. The chloroplast genome was determined to be 157,063 bp in length with a GC content of 37.30%. The genome contained 136 genes, including 91 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The sequence contained a large single-copy region (LSC, 86,661 bp), a small single-copy region (SSC, 18,284 bp), and two inverted repeat sequences (IRs, 26,059 bp, each). The GC content of the IR regions (42.96%) was higher than that of the SSC region (30.6%) and LSC region (35.31%). Phylogenetic analysis suggested that is closely related to with 96% bootstrap support. This chloroplast genome would be helpful for the phylogeny and conservation of .

摘要

Chang和钟YC是一种属于某属的植物。为了确定其正确的分类地位并更好地了解其分子系统发育和遗传多样性,我们研究了该物种的叶绿体基因组。在此,我们利用Illumina双端测序数据报告并描述了该物种完整的叶绿体(cp)基因组。叶绿体基因组长度为157,063 bp,GC含量为37.30%。该基因组包含136个基因,包括91个蛋白质编码基因、37个tRNA基因和8个rRNA基因。该序列包含一个大单拷贝区域(LSC,86,661 bp)、一个小单拷贝区域(SSC,18,284 bp)和两个反向重复序列(IRs,各26,059 bp)。IR区域的GC含量(42.96%)高于SSC区域(30.6%)和LSC区域(35.31%)。系统发育分析表明,该物种与某物种密切相关,自展支持率为96%。这个叶绿体基因组将有助于该物种的系统发育和保护。 (注:原文中部分属名未给出具体内容,翻译时用“某属”“某物种”表示)

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a02c/9067957/9a5f821d706b/TMDN_A_2068980_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a02c/9067957/9a5f821d706b/TMDN_A_2068980_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a02c/9067957/9a5f821d706b/TMDN_A_2068980_F0001_B.jpg

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