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一种高山野花(Rehd.)S.M.黄(虎耳草科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of an alpine wildflower, (Rehd.) S. M. Hwang (Saxifragaceae).

作者信息

Zhang Lijun, Zhang Dequan

机构信息

College of Pharmacy and Chemistry, Dali University, Dali, PR China.

Institute of Materia Medica, Dali University, Dali, PR China.

出版信息

Mitochondrial DNA B Resour. 2019 Dec 9;5(1):13-14. doi: 10.1080/23802359.2019.1693916.

Abstract

, belonging to the family Saxifragaceae, is a beautiful shrub with white fragrant flowers which is widely distributed in southwest China. In this study, we sequenced the complete chloroplast (cp) genome of to investigate its phylogenetic relationship in Saxifragaceae. Total length of the cpDNA genome was 157,237 bp, consisting of a large single copy (LSC) region of 86,481 bp, a small single copy (SSC) region of 18,728 bp, and a pair of inverted repeat regions (IRs, 26,014 bp). The genome contained 114 genes, namely 79 protein-coding genes, 31 tRNA genes, and 4 rRNA. The overall GC content was 37.8%. Phylogenetic analysis suggested that was closely related to . The present study was the first report on complete cp genome of so it could afford important genetic information for further researches on the genus and related genera.

摘要

[植物名称]属于虎耳草科,是一种美丽的灌木,开白色芳香花朵,广泛分布于中国西南部。在本研究中,我们对[植物名称]的完整叶绿体(cp)基因组进行了测序,以研究其在虎耳草科中的系统发育关系。cpDNA基因组全长157,237 bp,由一个86,481 bp的大单拷贝(LSC)区域、一个18,728 bp的小单拷贝(SSC)区域和一对反向重复区域(IRs,26,014 bp)组成。该基因组包含114个基因,即79个蛋白质编码基因、31个tRNA基因和4个rRNA基因。总体GC含量为37.8%。系统发育分析表明,[植物名称]与[另一植物名称]密切相关。本研究是关于[植物名称]完整cp基因组的首次报道,可为该属及相关属的进一步研究提供重要的遗传信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1809/7721011/f6b26d621511/TMDN_A_1693916_F0001_B.jpg

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