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毛茛科一种特有药用植物的叶绿体全基因组特征分析

Characterization of the complete chloroplast genome of (Ranunculaceae), an endemic medicinal herb.

作者信息

Wang Ze-Huan, Li Ya-Qiong

机构信息

Faculty of Traditional Chinese Pharmacy, Yunnan University of Traditional Chinese Medicine, Kunming, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 8;5(1):382-383. doi: 10.1080/23802359.2019.1703592.

Abstract

is an endemic medicinal herb, which has effects of relieving pains and is widely used to treat frostbite, rheumatoid arthritis, and so on. In this study, we sequenced the complete chloroplast genome with Illumina sequencing technology. The complete chloroplast genome length is 155,597 bp, shows a typical tetrad structure, which manifests as one large and one small single copy (LSC and SSC) regions of 86,336 and 16,961 bp, isolated by two inverted repeat regions (IRs) of 26,150 bp. This study annotated altogether 131 unique genes, consisting of 86 protein-encoding genes, 8 rRNA, and 37 tRNA. According to the maximum likelihood phylogenetic tree based on 20 complete chloroplast genomes, shows close association with additional subgenus. The chloroplast genome-wide for would help to conserving the precious natural populations.

摘要

是一种地方性药用植物,具有止痛作用,广泛用于治疗冻伤、类风湿性关节炎等。在本研究中,我们使用Illumina测序技术对完整的叶绿体基因组进行了测序。完整的叶绿体基因组长度为155,597 bp,呈现典型的四分体结构,表现为一个86,336 bp的大单拷贝(LSC)区域和一个16,961 bp的小单拷贝(SSC)区域,由两个26,150 bp的反向重复区域(IRs)隔开。本研究共注释了131个独特基因,包括86个蛋白质编码基因、8个rRNA和37个tRNA。根据基于20个完整叶绿体基因组的最大似然系统发育树, 与另外的 亚属显示出密切关联。 的叶绿体全基因组将有助于保护珍贵的自然种群。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0f53/7748560/d765b7e82a6e/TMDN_A_1703592_F0001_B.jpg

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