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一种濒危沉香树的完整叶绿体基因组特征分析

Characterization of the complete chloroplast genome of , an endangered agarwood-producing tree.

作者信息

Deng Xin, Jiang Zhenxing, Jiang Qingbin, Guo Wei, Li Yongquan, Zhang Xianzhi

机构信息

College of Horticulture and Landscape Architecture, Zhongkai University of Agriculture and Engineering, Guangzhou, China.

Research Institute of Tropical Forestry, Chinese Academy of Forestry, Guangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 8;5(1):422-423. doi: 10.1080/23802359.2019.1703593.

DOI:10.1080/23802359.2019.1703593
PMID:33366584
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7748732/
Abstract

is one of the most important agarwood-producing trees but critically endangered at present. In this study, we produced the complete chloroplast (cp) genome of via genome survey analysis. The assembled genome is 174,914 base-pairs (bp) in length, with one large single-copy region of 87,361 bp and one small single-copy region of 3347 bp separated by two inverted repeats of 42,103 bp. The genome contains a total of 142 genes, including 96 protein-coding genes, 8 rRNAs, and 38 tRNAs. The phylogenomic tree strongly supports as a monophyly and sister to .

摘要

是最重要的产沉香树之一，但目前处于极度濒危状态。在本研究中，我们通过基因组调查分析产生了[树名]的完整叶绿体（cp）基因组。组装后的基因组长度为174,914碱基对（bp），有一个87,361 bp的大单拷贝区域和一个3347 bp的小单拷贝区域，由两个42,103 bp的反向重复序列隔开。该基因组总共包含142个基因，包括96个蛋白质编码基因、8个rRNA和38个tRNA。系统发育树有力地支持[树名]为单系群，且[树名]与[另一树名]为姐妹关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87de/7748732/e177913c8ff3/TMDN_A_1703593_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87de/7748732/e177913c8ff3/TMDN_A_1703593_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87de/7748732/e177913c8ff3/TMDN_A_1703593_F0001_B.jpg

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