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(肉豆蔻科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Myristicaceae).

作者信息

Mao Chang-Li, Li Xiao-Qin, Zhang Feng-Liang, Yang Tian, Zhao Qi, Wu Yu

机构信息

Yunnan Institute of Tropical Crops, Jinghong, Xishuangbanna, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 20;5(1):729-730. doi: 10.1080/23802359.2020.1715278.

Abstract

is a member of Myristicaceae. The chloroplast genome is found to be 155,691 bp in length and has a base composition of A (30.02%), G (19.31%), C (19.89%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,122 bp) which were separated by a large single-copy (LSC) region (86,883 bp) and a small single-copy (SSC) region (20,686 bp). The chloroplast genome has 85 protein-coding genes, 27 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of was aligned together with two species of Myristicaceae and five basal angiosperms species for which the complete chloroplast sequence have been reported. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of .

摘要

属于肉豆蔻科。叶绿体基因组长度为155,691碱基对,碱基组成为A(30.02%)、G(19.31%)、C(19.89%)和T(30.78%)。该基因组包含两个短的反向重复(IRa和IRb)区域(48,122碱基对),它们被一个大单拷贝(LSC)区域(86,883碱基对)和一个小单拷贝(SSC)区域(20,686碱基对)隔开。叶绿体基因组有85个蛋白质编码基因、27个转运RNA(tRNA)基因和8个核糖体RNA(rRNA)基因。此外,[物种名称]的完整叶绿体序列与已报道完整叶绿体序列的两种肉豆蔻科植物和五种基部被子植物物种的序列进行了比对。这个完整的叶绿体基因组将为未来物种资源开发的DNA标记开发以及[物种名称]的系统发育分析提供有价值的信息。

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