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(肉豆蔻科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Myristicaceae).

作者信息

Zhang Feng-Liang, Yang Tian, Mao Chang-Li, Li Xiao-Qin, Zhao Qi, Wu Yu

机构信息

Yunnan Institute of Tropical Crops, Xishuangbanna, China.

出版信息

Mitochondrial DNA B Resour. 2020 Nov 13;5(3):3748-3749. doi: 10.1080/23802359.2020.1835574.

Abstract

is a member of Myristicaceae. The chloroplast genome is found to be 155,744 bp in length and has a base composition of A (30.02%), G (19.30%), C (19.90%), and T (30.78%). The genome contained two short inverted repeat (IRa and IRb) regions (48,052 bp) which were separated by a large single copy (LSC) region (86,926 bp) and a small single copy (SSC) region (20,770 bp). The genome encoded a total of 128 unigenes, including 89 protein-coding genes, 31 transfer RNA (tRNA) genes, and 8 ribosomal RNA (rRNA) genes. Further, complete chloroplast sequence of was aligned together with 2 species of Knema and 5 basal angiosperms species which have reported the complete chloroplast sequence. This complete chloroplast genome will provide valuable information for the development of DNA markers for future species resource development and phylogenetic analysis of .

摘要

是肉豆蔻科的一员。叶绿体基因组长度为155,744 bp,碱基组成为A(30.02%)、G(19.30%)、C(19.90%)和T(30.78%)。该基因组包含两个短的反向重复(IRa和IRb)区域(48,052 bp),它们被一个大单拷贝(LSC)区域(86,926 bp)和一个小单拷贝(SSC)区域(20,770 bp)隔开。该基因组总共编码128个单基因,包括89个蛋白质编码基因、31个转运RNA(tRNA)基因和8个核糖体RNA(rRNA)基因。此外,将[物种名称]的完整叶绿体序列与已报道完整叶绿体序列的2种红光树属植物和5种基部被子植物物种的序列进行比对。这个完整的叶绿体基因组将为未来物种资源开发的DNA标记开发以及[物种名称]的系统发育分析提供有价值的信息。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/97ea/7671699/f6b8457e1218/TMDN_A_1835574_F0001_B.jpg

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