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利用二代测序技术解析叶尔羌河高原鳅(鲤形目,鲤科,裂腹鱼亚科)线粒体全基因组及鲤科鱼类系统发育关系

Complete mitochondrial genome of the wild (Cypriniformes, Cyprinidae, Schizothoracinae) from Yeken River using next generation sequencing and the phylogenetic relationship of Cyprinidae species.

作者信息

Niu Jiangong, Zhang Yu, Liu Hong, Hu Jiangwei, Cai Lingang, Zhang Renming, Zhang Hui

机构信息

Xinjiang Fishery Research Institute, Urumqi, China.

Laboratory for Marine Ecology and Environmental Science, Qingdao National Laboratory for Marine Science and Technology, Qingdao, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jan 20;5(1):742-743. doi: 10.1080/23802359.2020.1715288.

Abstract

The complete mitochondrial genome of the wild collected from Yeken River was determined using next generation sequencing. The mitogenome is a circular molecule 16,765 bp in length, including 13 protein-coding genes, two ribosomal RNA genes, 22 transfer RNA genes, and a control region. The TAS, central CSB, and CSB were detected in the control region. The gene contents of the mitogenome are identical to those observed in most bony fishes. The NJ phylogenetic tree showed that clustered into one separate branch which is close to genus from the same subfamily.

摘要

利用二代测序技术测定了从叶肯河采集的野生样本的完整线粒体基因组。该线粒体基因组是一个长度为16,765 bp的环状分子,包括13个蛋白质编码基因、两个核糖体RNA基因、22个转运RNA基因和一个控制区。在控制区检测到了TAS、中央CSB和CSB。该线粒体基因组的基因组成与大多数硬骨鱼类中观察到的相同。NJ系统发育树显示,该样本聚为一个单独的分支,与来自同一亚科的某属关系密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/567f/7748880/eda0647710fa/TMDN_A_1715288_F0001_B.jpg

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