茄科（Solanaceae）完整叶绿体基因组序列的特征分析
Characterization of the complete chloroplast genome sequence of (Solanaceae).
作者信息
Tian Xing, Bai Ji-Qing, Yang Cong-Wei, Zhang Ying-Min, Li Guo-Dong
机构信息
Faculty of Traditional Chinese Pharmacy, Yunnan University of Chinese Medicine, Kunming, China.
College of Pharmacy, Shanxi University of Chinese Medicine, Xianyang, China.
出版信息
Mitochondrial DNA B Resour. 2020 Jan 27;5(1):893-894. doi: 10.1080/23802359.2020.1717387.
is a Solanaceae perennial plant, which is endemic to China and classified as an endangered species. In this study, we have sequenced the complete chloroplast genome of , which is 156,079 bp in length, containing a large single-copy (LSC) region of 86,526 bp, a small single-copy (SSC) region of 17,741 bp and comprises a pair of inverted repeat regions (IRs) of 25,906 bp. Totally 134 genes were annotated, including 87 protein-coding genes, 39 tRNA genes, and 8 rRNA genes. Its overall GC content is 37.6%. Phylogenetic analysis using total chloroplast genome DNA sequence of 21 species revealed that was closely related to with 100% bootstrap value.
是一种茄科多年生植物，原产于中国，被列为濒危物种。在本研究中，我们对其完整的叶绿体基因组进行了测序，其长度为156,079 bp，包含一个86,526 bp的大单拷贝（LSC）区域、一个17,741 bp的小单拷贝（SSC）区域，并由一对25,906 bp的反向重复区域（IRs）组成。总共注释了134个基因，包括87个蛋白质编码基因、39个tRNA基因和8个rRNA基因。其总体GC含量为37.6%。使用21个物种的总叶绿体基因组DNA序列进行的系统发育分析表明，与的关系密切，自展值为100%。
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