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(车前科)的完整质体基因组序列:一种喜马拉雅地区特有的濒危物种。

The complete plastid genome sequence of (Plantaginaceae): an endangered species endemic to The Himalayas regions.

作者信息

Zhang Ying-Min, Qian Zi-Gang, Zhang Ai-Li, Yang Cong-Wei, Li Guo-Dong, Liu Xiao-Li

机构信息

Faculty of Traditional Chinese Pharmacy, Yunnan University of Chinese Medicine, Yunnan, China.

Yunnan Key Laboratory for Dai and Yi Medicines, Yunnan University of Chinese Medicine, Yunnan, China.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 16;4(2):2504-2505. doi: 10.1080/23802359.2019.1639560.

Abstract

(Pennell) Hong, an endangered perennial species, is endemic to the Eastern Himalayas and Hengduan Mountains. In this study, we have sequenced the complete chloroplast genome of , which is 152,643 bp in length, including two inverted repeat (IR, 25,829 bp) regions, one large single copy region (LSC) and one small single copy region (SSC) of 83,191 bp and 17,794 bp, respectively. The cp genome has 131 annotated genes, including 86 protein-coding genes, 37 tRNA genes, and eight rRNA genes. The overall GC content of it is 38.1%. Phylogenetic analysis using total chloroplast genome DNA sequence of 14 species revealed that was closely relates to two species of with 100% bootstrap value.

摘要

(彭内尔)洪氏(Hong)是一种濒危的多年生物种,为东喜马拉雅和横断山脉所特有。在本研究中,我们对洪氏的完整叶绿体基因组进行了测序,其长度为152,643 bp,包括两个反向重复(IR,25,829 bp)区域、一个83,191 bp的大单拷贝区域(LSC)和一个17,794 bp的小单拷贝区域(SSC)。叶绿体基因组有131个注释基因,包括86个蛋白质编码基因、37个tRNA基因和8个rRNA基因。其总体GC含量为38.1%。使用14个物种的总叶绿体基因组DNA序列进行的系统发育分析表明,洪氏与两种[此处原文缺失物种名]关系密切,自展值为100%。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/09b9/7687538/c7c37a43bb6f/TMDN_A_1639560_F0001_B.jpg

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