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向日葵科(菊科)物种叶绿体全基因组的特征分析

Characterization of the complete chloroplast genome of sunflower family species (Compositae).

作者信息

Zhou Huijuan, She Ruixue, Xu Yuan, Zhao Peng, Zhang Shuoxin

机构信息

College of Forestry, Northwest A&F University, Yangling, China.

Key Laboratory of Resource Biology and Biotechnology in Western China, Ministry of Education, College of Life Sciences, Northwest University, Xi'an, China.

出版信息

Mitochondrial DNA B Resour. 2019 Nov 18;4(2):4096-4097. doi: 10.1080/23802359.2019.1692710.

Abstract

is a perennial medicinal plant belong the sunflower family Compositae, which is widely distributed in China and some other Asian countries. The complete chloroplast genome sequence of was sequenced using the Illumina Hiseq 4000 platform. The size of the chloroplast genome is 151,329 bp, with an average GC content of 37.5%. This circular molecule has a typical quadripartite structure containing a large single copy (LSC) region of 83,480 bp, a small single copy (SSC) region of 18,149 bp, and two inverted (IRs) repeat regions of 24,850 bp. A total of 132 genes were successfully annotated containing 87 protein-coding genes, 37 tRNA genes, 8 rRNA genes. A maximum likelihood (ML) phylogenetic tree supported that the chloroplast genome of is closely related to that of

摘要

是一种属于菊科的多年生药用植物,在中国和其他一些亚洲国家广泛分布。使用Illumina Hiseq 4000平台对其完整叶绿体基因组序列进行了测序。其叶绿体基因组大小为151,329 bp,平均GC含量为37.5%。这个环状分子具有典型的四分体结构,包含一个83,480 bp的大单拷贝(LSC)区域、一个18,149 bp的小单拷贝(SSC)区域和两个24,850 bp的反向(IRs)重复区域。总共成功注释了132个基因,其中包括87个蛋白质编码基因、37个tRNA基因、8个rRNA基因。一个最大似然(ML)系统发育树支持其叶绿体基因组与……的叶绿体基因组密切相关 。

原文中部分关键植物名称缺失,已用“”表示。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f670/7707666/311debe500b5/TMDN_A_1692710_F0001_B.jpg

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