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(Bge.)索科的完整叶绿体基因组

The complete chloroplast genome of (Bge.) Sok.

作者信息

Tian Ying, Liu Jing, Xu Zhe

机构信息

School of Agriculture, Ningxia University, Yinchuan, Ningxia, China.

State Key Laboratory of Seeding Bioengineering, Ningxia Forestry Institute, Yinchuan, Ningxia, China.

出版信息

Mitochondrial DNA B Resour. 2020 Mar 2;5(2):1210-1212. doi: 10.1080/23802359.2020.1730261. eCollection 2020.

Abstract

The chloroplast (cp) genome sequence of has been characterized from Illumina pair-end sequencing. The complete cp genome was 158,082 bp in length, containing a large single-copy region (LSC) of 86,273 bp and a small single copy region (SSC) of 19,039 bp, which were separated by a pair of 26,385 bp inverted repeat regions (IRs). The genome contained 131 genes, including 86 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. The overall GC content is 36.7%, while the corresponding values of the LSC, SSC, and IR regions are 34.6, 29.5, and 42.6%, respectively. Phylogenetic reconstruction using 59 conserved coding-protein genes clustered . within Eurosids I.

摘要

已通过Illumina双端测序对[物种名称]的叶绿体(cp)基因组序列进行了表征。完整的cp基因组长度为158,082 bp,包含一个86,273 bp的大单拷贝区域(LSC)和一个19,039 bp的小单拷贝区域(SSC),它们被一对26,385 bp的反向重复区域(IRs)隔开。该基因组包含131个基因,包括86个蛋白质编码基因、37个tRNA基因和8个rRNA基因。总体GC含量为36.7%,而LSC、SSC和IR区域的相应值分别为34.6%、29.5%和42.6%。使用59个保守编码蛋白基因进行的系统发育重建将[物种名称]聚类在真双子叶植物I类中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0165/7510817/75f2031e140d/TMDN_A_1730261_F0001_B.jpg

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