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芸香科(Rutaceae)的叶绿体基因组与系统发育分析。

Chloroplast genome and phylogenetic analyses of (Rutaceae).

作者信息

He Shui-Lian, Tian Yang, Yang Yang, Shi Chong-Ying

机构信息

College of Horticulture and Landscape, Yunnan Agricultural University, Kunming, China.

Yunnan Key Laboratory of Biomass Big Data, Yunnan Agricultural University, Kunming, China.

出版信息

Mitochondrial DNA B Resour. 2020 Jun 1;5(3):2205-2206. doi: 10.1080/23802359.2019.1687023. eCollection 2020.

Abstract

is an important medicinal plant that is used to treat human diseases. In this study, the complete chloroplast (cp) genome of was assembled based on the Illumina sequencing reads. The cp genome of was 160,260 bp and contained two short inverted repeat regions (27,029 bp) which were separated by a small single copy region (18,760 bp) and a large single copy region (87,442 bp). The cp genome encodes 113 unique genes, including 79 protein-coding genes, 30 transfer RNA genes and 4 ribosomal RNA genes. The topology of the phylogenetic tree showed that is closely clustered with genus .

摘要

是一种用于治疗人类疾病的重要药用植物。在本研究中,基于Illumina测序读数组装了该植物的完整叶绿体(cp)基因组。该植物的cp基因组为160,260 bp,包含两个短的反向重复区域(27,029 bp),它们被一个小单拷贝区域(18,760 bp)和一个大单拷贝区域(87,442 bp)隔开。cp基因组编码113个独特基因,包括79个蛋白质编码基因、30个转运RNA基因和4个核糖体RNA基因。系统发育树的拓扑结构表明,该植物与属紧密聚类。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4d8d/7510678/a17e6c8ac493/TMDN_A_1687023_F0001_B.jpg

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