应用叶绿体基因组对茄科及其相关物种进行系统发育分析。
Phylogenetic analyses of (Solanaceae) and its coordinal species applying chloroplast genome.
作者信息
He Shui-Lian, Tian Yang, Yang Yang, Shi Chong-Ying
机构信息
College of Horticulture and Landscape, Yunnan Agricultural University, Kunming, Yunnan, China.
Yunnan Key Laboratory of Biomass Big Data, Yunnan Agricultural University, Kunming, Yunnan, China.
出版信息
Mitochondrial DNA B Resour. 2020 Jun 1;5(3):2201-2202. doi: 10.1080/23802359.2019.1669087. eCollection 2020.
is an important edible and medicinal plant. Now, the complete chloroplast (cp) genome of was assembled based on the Illumina sequencing reads. The cp genome of was 155,736 bp long and contained two short inverted repeat regions (25,469 bp), which were separated by a small single-copy region (18,206 bp) and a large single-copy region (86,592 bp). The cp genome encodes 113 unique genes, including 79 protein-coding genes, 30 transfer RNA genes, and 4 ribosomal RNA genes. The topology of the phylogenetic tree showed that is closely clustered with species and .
是一种重要的食用和药用植物。现在，基于Illumina测序读数组装了 的完整叶绿体（cp）基因组。 的cp基因组长度为155,736 bp，包含两个短的反向重复区域（25,469 bp），它们被一个小单拷贝区域（18,206 bp）和一个大单拷贝区域（86,592 bp）隔开。cp基因组编码113个独特基因，包括79个蛋白质编码基因、30个转运RNA基因和4个核糖体RNA基因。系统发育树的拓扑结构表明， 与物种 和 紧密聚类。
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