Lour.的完整叶绿体基因组序列
The complete chloroplast genome sequence of Lour.
作者信息
Ma Mengli, Lu Bingyue
机构信息
Key Laboratory for Research and Utilization of Characteristic Biological Resources in Southern Yunnan, College of Life Science and Technology, Honghe University, Mengzi, PR China.
出版信息
Mitochondrial DNA B Resour. 2020 Feb 3;5(1):1042-1043. doi: 10.1080/23802359.2020.1721358.
Lour. (Zingiberaceae) is an important edible and medicinal crop. The complete chloroplast (cp) genome of was determined using Illumina sequencing platform. The size of whole cp genome was 164,069 bp, containing a small single copy (SSC) region of 15,353 bp and a large single copy (LSC) region of 88,798 bp, which were separated by a pair of inverted repeat (IRs) regions (29,959 bp). The cp genome contained 133 genes, including eight ribosomal RNA genes (4 rRNA species), 38 transfer RNA genes (30 tRNA species) and 87 protein-coding genes (79 PCG species). The overall GC content of cp genome is 36.05%. To investigate the evolution status of , as well as Zingiberales, a phylogenetic tree with and other 21 species was constructed based on their complete chloroplast genomes. Phylogenetic analysis revealed that was closely related to .
姜黄（姜科）是一种重要的食用和药用作物。利用Illumina测序平台测定了姜黄的完整叶绿体（cp）基因组。整个cp基因组大小为164,069 bp，包含一个15,353 bp的小单拷贝（SSC）区域和一个88,798 bp的大单拷贝（LSC）区域，它们被一对反向重复（IR）区域（29,959 bp）隔开。姜黄cp基因组包含133个基因，包括8个核糖体RNA基因（4种rRNA）、38个转运RNA基因（30种tRNA）和87个蛋白质编码基因（79种PCG）。姜黄cp基因组的总体GC含量为36.05%。为了研究姜黄以及姜目植物的进化地位，基于其完整叶绿体基因组构建了包含姜黄和其他21个物种的系统发育树。系统发育分析表明姜黄与[此处原文缺失相关物种名]关系密切。
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