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2018 - 2019年期间从中国中部和东部宠物狗中收集的犬细小病毒毒株的基因特征及本地基因型

Genetic Characterisation and Local Genotypes of Canine Parvovirus Strains Collected from Pet Dogs in Central and Eastern China During 2018-2019.

作者信息

Hu Wen, Zheng Liangyan, Xu Xin, Liu Qiang, Ji Jun, Yao Lunguang, Kan Yunchao, Bi Yingzuo

机构信息

Henan Provincial Engineering Laboratory of Insects Bio-reactor, Henan Provincial Engineering and Technology Center of Health Products for Livestock and Poultry, Nanyang Normal University, Nanyang, 473061, PR China.

Chengdu Agricultural College, Chengdu, 611130, PR China.

出版信息

J Vet Res. 2020 Nov 19;64(4):477-486. doi: 10.2478/jvetres-2020-0076. eCollection 2020 Dec.

Abstract

INTRODUCTION

Canine parvovirus type-2 (CPV-2) causes acute infectious diseases in puppies, which show high morbidity and mortality. Better effect of vaccination against these diseases could be achieved with deeper knowledge of CPV-2 genotype dissemination and mutation history. This study investigated CPV-2-positive samples collected recently over a wide region of China.

MATERIAL AND METHODS

A total of 118 faecal samples from dogs identified as CPV-positive were collected from veterinary clinics in central and eastern China. Overall, 16 strains collected from Anhui, 29 from Henan, and 16 from Zhejiang Province were sequenced to determine the genotypic composition of CPV-2 and mutational complexity of CPV-VP2.

RESULTS

The CPV-2a, CPV-2b, and CPV-2c genotypes were detected in Anhui and Henan Provinces, while CPV-2c alone was detected in Zhejiang Province. Sequence analysis of all strains showed 98.5%-99.8%, 98.3%-99.9%, and 98.7%-99.8% identity among the 16 Anhui, 29 Henan, and 16 Zhejiang strains, respectively. Strains collected from Anhui and Henan Provinces showed lower identity (97.0%), suggesting greater genetic divergence in central China. The mutation rates of Henan and Anhui strains were lower than that of Zhejiang strains. Major amino acid mutations occurred at sites 5, 370, 426, and 440. Epitope and entropy analyses implied these sites' likely conformance to the principles of mutation tendency, complexity, and diversity.

CONCLUSION

The findings for the evolutionary structure of CPV-2 strains collected from three provinces in central and eastern China advance trend monitoring of the genetic variation in canine parvovirus and point to its implications in the development of novel vaccines.

摘要

引言

犬细小病毒2型(CPV - 2)可导致幼犬急性传染病,发病率和死亡率都很高。深入了解CPV - 2基因型传播和突变历史,能更好地实现针对这些疾病的疫苗接种效果。本研究调查了近期在中国广大地区收集的CPV - 2阳性样本。

材料与方法

从中国中部和东部的兽医诊所收集了总共118份被鉴定为CPV阳性的犬粪便样本。总体而言,对从安徽省收集的16株、河南省收集的29株和浙江省收集的16株进行测序,以确定CPV - 2的基因型组成和CPV - VP2的突变复杂性。

结果

在安徽省和河南省检测到CPV - 2a、CPV - 2b和CPV - 2c基因型,而在浙江省仅检测到CPV - 2c基因型。对所有菌株的序列分析表明,16株安徽菌株、29株河南菌株和16株浙江菌株之间的同一性分别为98.5% - 99.8%、98.3% - 99.9%和98.7% - 99.8%。从安徽省和河南省收集的菌株显示出较低的同一性(97.0%),表明中国中部地区的遗传差异更大。河南和安徽菌株的突变率低于浙江菌株。主要氨基酸突变发生在第5、370、426和440位点。表位和熵分析表明这些位点可能符合突变倾向、复杂性和多样性原则。

结论

从中国中部和东部三个省份收集的CPV - 2菌株的进化结构研究结果,推进了犬细小病毒遗传变异的趋势监测,并指出了其在新型疫苗开发中的意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be3e/7734690/3b137f32e1de/jvetres-64-477-g001.jpg

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