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桑树叶片铜胁迫调控及新型 microRNA 的全基因组鉴定

Genome-Wide Identification of Copper Stress-Regulated and Novel MicroRNAs in Mulberry Leaf.

机构信息

Key Laboratory of Silkworm and Mulberry Genetic Improvement, Ministry of Agriculture, School of Biology and Technology, Jiangsu University of Science and Technology, Zhenjiang, Jiangsu, People's Republic of China.

Sericultural Research Institute, Guangxi Zhuang Autonomous Regin, Nanning, 530007, People's Republic of China.

出版信息

Biochem Genet. 2021 Apr;59(2):589-603. doi: 10.1007/s10528-020-10021-y. Epub 2021 Jan 3.

DOI:10.1007/s10528-020-10021-y
PMID:33389282
Abstract

Copper (Cu) is an essential trace element for plant growth and development. It is widely involved in respiration, photosynthesis, pollen formation, and other biological processes. Therefore, low or excessive copper causes damage to plants. Mulberry is an essential perennial economic tree. At present, research on the abiotic stress responses in mulberry is mainly focused on the identification of resistant germplasm resources and cloning of resistant genes. In contrast, studies on the resistance function of microRNAs and the regulatory gene responses to stress are rare. In this study, small RNA libraries (control and copper stressed) were constructed from mulberry leaf RNA. High-throughput sequencing and screening were employed, a total of 65 known miRNAs and 78 predicted novel mature miRNAs were identified, among which 40 miRNAs were differentially expressed under copper stress. Subsequently, expression patterns were verified for 14 miRNAs by real-time fluorescence quantitative PCR (qPCR). The target genes of miRNAs were validated by 5' RLM-RACE. Our results provide the bases for further study on the molecular mechanism of copper stress regulation in mulberry.

摘要

铜(Cu)是植物生长和发育所必需的微量元素。它广泛参与呼吸、光合作用、花粉形成等生物过程。因此,铜含量过低或过高都会对植物造成损害。桑树是一种重要的多年生经济树种。目前,桑树对非生物胁迫响应的研究主要集中在抗性种质资源的鉴定和抗性基因的克隆上。相比之下,关于 microRNAs 的抗性功能和调控基因对应激的响应研究则较少。在本研究中,我们构建了桑树叶片 RNA 的小 RNA 文库(对照和铜胁迫)。通过高通量测序和筛选,共鉴定出 65 个已知的 miRNA 和 78 个预测的新成熟 miRNA,其中 40 个 miRNA 在铜胁迫下差异表达。随后,通过实时荧光定量 PCR(qPCR)验证了 14 个 miRNA 的表达模式。通过 5' RLM-RACE 验证了 miRNA 的靶基因。我们的研究结果为进一步研究桑树铜胁迫调控的分子机制提供了基础。

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本文引用的文献

1
Copper in plants: acquisition, transport and interactions.植物中的铜:吸收、运输及相互作用
Funct Plant Biol. 2009 May;36(5):409-430. doi: 10.1071/FP08288.
2
Identification of copper (Cu) stress-responsive grapevine microRNAs and their target genes by high-throughput sequencing.通过高通量测序鉴定铜(Cu)胁迫响应的葡萄微小RNA及其靶基因。
R Soc Open Sci. 2019 Jan 23;6(1):180735. doi: 10.1098/rsos.180735. eCollection 2019 Jan.
3
Genotype- and tissue-specific miRNA profiles and their targets in three alfalfa (Medicago sativa L) genotypes.
茶环状 RNA 的进化景观及其对茶树耐冷性的贡献。
Int J Mol Sci. 2023 Jan 12;24(2):1478. doi: 10.3390/ijms24021478.
4
microRNAs: Key Players in Plant Response to Metal Toxicity.microRNAs:植物应对金属毒性的关键调节因子。
Int J Mol Sci. 2022 Aug 3;23(15):8642. doi: 10.3390/ijms23158642.
5
Comparative Proteomic Analysis of Tolerant and Sensitive Varieties Reveals That Phenylpropanoid Biosynthesis Contributes to Salt Tolerance in Mulberry.耐盐和敏感品种的比较蛋白质组学分析表明,苯丙烷生物合成有助于桑树的耐盐性。
Int J Mol Sci. 2021 Aug 30;22(17):9402. doi: 10.3390/ijms22179402.
三种紫花苜蓿(Medicago sativa L.)基因型中的组织和基因型特异性 miRNA 谱及其靶标。
BMC Genomics. 2018 Dec 31;19(Suppl 10):913. doi: 10.1186/s12864-018-5280-y.
4
Improvement of abiotic stress adaptive traits in mulberry (Morus spp.): an update on biotechnological interventions.桑树(桑属)非生物胁迫适应性性状的改良:生物技术干预的最新进展
3 Biotech. 2017 Jul;7(3):214. doi: 10.1007/s13205-017-0829-z. Epub 2017 Jul 1.
5
Repression of miR156 by miR159 Regulates the Timing of the Juvenile-to-Adult Transition in Arabidopsis.miR159对miR156的抑制作用调控拟南芥从幼年到成年转变的时间。
Plant Cell. 2017 Jun;29(6):1293-1304. doi: 10.1105/tpc.16.00975. Epub 2017 May 23.
6
Study on Expression Modes and Cleavage Role of miR156b/c/d and its Target Gene Vv-SPL9 During the Whole Growth Stage of Grapevine.葡萄整个生长阶段miR156b/c/d及其靶基因Vv-SPL9的表达模式与切割作用研究
J Hered. 2016;107(7):626-634. doi: 10.1093/jhered/esw030. Epub 2016 Sep 22.
7
Genome-wide identification of abiotic stress-regulated and novel microRNAs in mulberry leaf.在桑树叶中全基因组鉴定非生物胁迫调节和新型 microRNAs
Plant Physiol Biochem. 2015 Oct;95:75-82. doi: 10.1016/j.plaphy.2015.07.007. Epub 2015 Jul 9.
8
Stress responsive miRNAs and isomiRs in cereals.应激响应 miRNA 和同工型 miRNA 在谷物中的研究进展
Plant Sci. 2015 Jun;235:1-13. doi: 10.1016/j.plantsci.2015.02.008. Epub 2015 Feb 20.
9
Laccases direct lignification in the discrete secondary cell wall domains of protoxylem.漆酶引导原生木质部离散次生细胞壁区域的木质化过程。
Plant Physiol. 2014 Oct;166(2):798-807. doi: 10.1104/pp.114.245597. Epub 2014 Aug 25.
10
Inhibition of photosynthesis by heavy metals.重金属对光合作用的抑制作用。
Photosynth Res. 1985 Jan;7(1):31-40. doi: 10.1007/BF00032920.