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将癌症基因组图谱用作本科课堂的探究工具。

Using The Cancer Genome Atlas as an Inquiry Tool in the Undergraduate Classroom.

作者信息

Hankey William, Zanghi Nicholas, Crow Mackenzie M, Dow Whitney H, Kratz Austin, Robinson Ashley M, Robinson Meaghan R, Segarra Verónica A

机构信息

Department of Pathology, Duke Cancer Center, Duke University, Durham, NC, United States.

Department of Biology, High Point University, High Point, NC, United States.

出版信息

Front Genet. 2020 Dec 16;11:573992. doi: 10.3389/fgene.2020.573992. eCollection 2020.

DOI:10.3389/fgene.2020.573992
PMID:33391340
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7772960/
Abstract

Undergraduate students in the biomedical sciences are often interested in future health-focused careers. This presents opportunities for instructors in genetics, molecular biology, and cancer biology to capture their attention using lab experiences built around clinically relevant data. As biomedical science in general becomes increasingly dependent on high-throughput data, well-established scientific databases such as The Cancer Genome Atlas (TCGA) have become publicly available tools for medically relevant inquiry. The best feature of this database is that it bridges the molecular features of cancer to human clinical outcomes-allowing students to see a direct connection between the molecular sciences and their future professions. We have developed and tested a learning module that leverages the power of TCGA datasets to engage students to use the data to generate and test hypotheses and to apply statistical tests to evaluate significance.

摘要

生物医学科学专业的本科生通常对未来以健康为重点的职业感兴趣。这为遗传学、分子生物学和癌症生物学领域的教师提供了机会,他们可以利用围绕临床相关数据构建的实验室体验来吸引学生的注意力。随着一般生物医学科学越来越依赖高通量数据,诸如癌症基因组图谱(TCGA)等成熟的科学数据库已成为医学相关研究的公开可用工具。该数据库的最大优点是它将癌症的分子特征与人类临床结果联系起来,使学生能够看到分子科学与其未来职业之间的直接联系。我们开发并测试了一个学习模块,该模块利用TCGA数据集的力量,促使学生使用这些数据来生成和检验假设,并应用统计测试来评估显著性。

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本文引用的文献

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OncoSim and OncoWiki: an authentic learning approach to teaching cancer genomics.OncoSim 和 OncoWiki:一种教授癌症基因组学的真实学习方法。
BMC Med Educ. 2019 Nov 7;19(1):407. doi: 10.1186/s12909-019-1812-7.
2
R You Still Using Excel? The Advantages of Modern Software Tools for Health Technology Assessment.R 还在用 Excel 吗?健康技术评估现代化软件工具的优势。
Value Health. 2019 May;22(5):575-579. doi: 10.1016/j.jval.2019.01.003.
3
Student performance on the Test of Scientific Literacy Skills (TOSLS) does not change with assignment of a low-stakes grade.学生在科学素养技能测试(TOSLS)中的表现不会因给予低风险成绩而改变。
BMC Res Notes. 2018 Jul 3;11(1):422. doi: 10.1186/s13104-018-3545-9.
4
Physician preparedness for big genomic data: a review of genomic medicine education initiatives in the United States.医生应对大型基因组数据的准备情况:美国基因组医学教育计划述评。
Hum Mol Genet. 2018 Aug 1;27(R2):R250-R258. doi: 10.1093/hmg/ddy170.
5
An Integrated TCGA Pan-Cancer Clinical Data Resource to Drive High-Quality Survival Outcome Analytics.TCGA 泛癌临床数据资源整合,推动高质量生存预后分析。
Cell. 2018 Apr 5;173(2):400-416.e11. doi: 10.1016/j.cell.2018.02.052.
6
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JAMA Oncol. 2017 Dec 1;3(12):1654-1662. doi: 10.1001/jamaoncol.2017.0595.
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A Call to Develop Course-Based Undergraduate Research Experiences (CUREs) for Nonmajors Courses.呼吁为非专业课程开发基于课程的本科研究体验 (CUREs)。
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