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扩展 - 相关视锥 - 视杆营养不良的临床和基因谱:意大利家族中新型变异的致病性

Expanding the Clinical and Genetic Spectrum of -Related Cone-Rod Dystrophy: Pathogenicity of Novel Variants in Italian Families.

作者信息

Iarossi Giancarlo, Marino Valerio, Maltese Paolo Enrico, Colombo Leonardo, D'Esposito Fabiana, Manara Elena, Dhuli Kristjana, Modarelli Antonio Mattia, Cennamo Gilda, Magli Adriano, Dell'Orco Daniele, Bertelli Matteo

机构信息

Department of Ophthalmology, Bambino Gesù Children's Hospital, 00165 Rome, Italy.

Department of Neurosciences, Biomedicine and Movement Sciences, Section of Biological Chemistry, University of Verona, 37134 Verona, Italy.

出版信息

Int J Mol Sci. 2020 Dec 31;22(1):381. doi: 10.3390/ijms22010381.

Abstract

The small Ras-related GTPase Rab-28 is highly expressed in photoreceptor cells, where it possibly participates in membrane trafficking. To date, six alterations in the gene have been associated with autosomal recessive cone-rod dystrophies. Confirmed variants include splicing variants, missense and nonsense mutations. Here, we present a thorough phenotypical and genotypical characterization of five individuals belonging to four Italian families, constituting the largest cohort of patients reported in literature to date. All probands displayed similar clinical phenotype consisting of photophobia, decreased visual acuity, central outer retinal thinning, and impaired color vision. By sequencing the four probands, we identified: a novel homozygous splicing variant; two novel nonsense variants in homozygosis; a novel missense variant in compound heterozygous state with a previously reported nonsense variant. Exhaustive molecular dynamics simulations of the missense variant p.(Thr26Asn) in both its active and inactive states revealed an allosteric structural mechanism that impairs the binding of Mg, thus decreasing the affinity for GTP. The impaired GTP-GDP exchange ultimately locks Rab-28 in a GDP-bound inactive state. The loss-of-function mutation p.(Thr26Asn) was present in a compound heterozygosis with the nonsense variant p.(Arg137*), which does not cause mRNA-mediated decay, but is rather likely degraded due to its incomplete folding. The frameshift p.(Thr26Valfs4*) and nonsense p.(Leu13*) and p.(Trp107*) variants, if translated, would lack several key structural components necessary for the correct functioning of the encoded protein.

摘要

小的Ras相关GTP酶Rab-28在光感受器细胞中高度表达,它可能参与膜运输。迄今为止,该基因的六种改变已与常染色体隐性锥杆营养不良相关。已确认的变异包括剪接变异、错义突变和无义突变。在这里,我们对来自四个意大利家庭的五名个体进行了全面的表型和基因型特征分析,这是迄今为止文献报道的最大患者队列。所有先证者都表现出相似的临床表型,包括畏光、视力下降、中央视网膜外层变薄和色觉受损。通过对四名先证者进行测序,我们鉴定出:一种新的纯合剪接变异;两种新的纯合无义变异;一种新的错义变异,与先前报道的无义变异呈复合杂合状态。对处于活性和非活性状态的错义变异p.(Thr26Asn)进行详尽的分子动力学模拟,揭示了一种变构结构机制,该机制损害了Mg的结合,从而降低了对GTP的亲和力。受损的GTP-GDP交换最终将Rab-28锁定在GDP结合的非活性状态。功能丧失突变p.(Thr26Asn)与无义变异p.(Arg137*)呈复合杂合状态,后者不会导致mRNA介导的衰变,而是由于其折叠不完全而可能被降解。移码变异p.(Thr26Valfs4*)、无义变异p.(Leu13*)和p.(Trp107*)如果被翻译,将缺少编码蛋白正确发挥功能所需的几个关键结构成分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/71e7/7795990/3cb0ba64d22d/ijms-22-00381-g001.jpg

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