Peter Virginie G, Kaminska Karolina, Santos Cristina, Quinodoz Mathieu, Cancellieri Francesca, Cisarova Katarina, Pescini Gobert Rosanna, Rodrigues Raquel, Custódio Sónia, Paris Liliana P, Sousa Ana Berta, Coutinho Santos Luisa, Rivolta Carlo
Institute of Molecular and Clinical Ophthalmology Basel (IOB), Basel 4031, Switzerland.
Department of Ophthalmology, University of Basel, Basel 4031, Switzerland.
PNAS Nexus. 2023 Feb 13;2(3):pgad043. doi: 10.1093/pnasnexus/pgad043. eCollection 2023 Mar.
Inherited retinal diseases (IRDs) are a group of ocular conditions characterized by an elevated genetic and clinical heterogeneity. They are transmitted almost invariantly as monogenic traits. However, with more than 280 disease genes identified so far, association of clinical phenotypes with genotypes can be very challenging, and molecular diagnosis is essential for genetic counseling and correct management of the disease. In addition, the prevalence and the assortment of IRD mutations are often population-specific. In this work, we examined 230 families from Portugal, with individuals suffering from a variety of IRD diagnostic classes (270 subjects in total). Overall, we identified 157 unique mutations (34 previously unreported) in 57 distinct genes, with a diagnostic rate of 76%. The IRD mutational landscape was, to some extent, different from those reported in other European populations, including Spanish cohorts. For instance, the gene appeared to be the most frequently mutated, with a prevalence of 10% among all IRD cases. This was, in part, due to the presence of a recurrent and seemingly founder mutation involving the deletion of exons 13 and 14 of this gene. Moreover, our analysis highlighted that as many as 51% of our cases had mutations in a homozygous state. To our knowledge, this is the first study assessing a cross-sectional genotype-phenotype landscape of IRDs in Portugal. Our data reveal a rather unique distribution of mutations, possibly shaped by a small number of rare ancestral events that have now become prevalent alleles in patients.
遗传性视网膜疾病(IRDs)是一组眼部疾病,其特点是具有高度的遗传和临床异质性。它们几乎总是作为单基因性状遗传。然而,到目前为止已鉴定出280多个疾病基因,临床表型与基因型的关联可能极具挑战性,分子诊断对于遗传咨询和疾病的正确管理至关重要。此外,IRD突变的患病率和种类往往因人群而异。在这项研究中,我们调查了来自葡萄牙的230个家庭,家庭成员患有各种IRD诊断类型(总共270名受试者)。总体而言,我们在57个不同基因中鉴定出157个独特突变(34个以前未报告),诊断率为76%。IRD的突变图谱在一定程度上与其他欧洲人群(包括西班牙队列)报告的不同。例如,该基因似乎是最常发生突变的基因,在所有IRD病例中的患病率为10%。部分原因是存在一个涉及该基因第13和14外显子缺失的反复出现且似乎是奠基者的突变。此外,我们的分析强调,多达51%的病例存在纯合状态的突变。据我们所知,这是第一项评估葡萄牙IRD横断面基因型-表型图谱的研究。我们的数据揭示了一种相当独特的突变分布,可能是由少数罕见的祖先事件形成的,这些事件现在已成为患者中的流行等位基因。