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鸡βA珠蛋白基因启动子中精确的核小体定位

Precise nucleosome positioning in the promoter of the chicken beta A globin gene.

作者信息

Kefalas P, Gray F C, Allan J

机构信息

Department of Biophysics, Cell and Molecular Biology, King's, Queen's and Chelsea College, London, UK.

出版信息

Nucleic Acids Res. 1988 Jan 25;16(2):501-17. doi: 10.1093/nar/16.2.501.

Abstract

Histone octamers were reconstituted onto 5' end-labelled DNA fragments derived from the promoter region of the chicken beta A globin gene. The location of the reconstituted histone octamer with respect to the DNA sequence of each fragment was assessed by Exonuclease III digestion of purified nucleosome monomers. By this approach we have found a strong preference for histone octamers to be positioned over nucleotides -206 to -62 relative to the gene cap site. This stretch of DNA contains all those 5' beta globin sequences which, by DNase footprinting, bind specific protein factors and incorporates three promoter consensus sequence motifs. The upstream terminal 32 base pairs of this DNA segment contains the binding sites for the erythrocyte specific G-string binding protein and transcription factor Spl and appears to be relatively weakly bound to the histone octamer.

摘要

组蛋白八聚体被重组到源自鸡βA珠蛋白基因启动子区域的5'端标记的DNA片段上。通过对纯化的核小体单体进行核酸外切酶III消化,评估重组的组蛋白八聚体相对于每个片段DNA序列的位置。通过这种方法,我们发现组蛋白八聚体强烈倾向于定位在相对于基因帽位点的-206至-62核苷酸上。这段DNA包含所有那些通过DNA酶足迹法与特定蛋白质因子结合并包含三个启动子共有序列基序的5'β珠蛋白序列。该DNA片段的上游末端32个碱基对包含红细胞特异性G串结合蛋白和转录因子Spl的结合位点,并且似乎与组蛋白八聚体的结合相对较弱。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6b96/334675/869853205385/nar00144-0131-a.jpg

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