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寡聚[d(C)·(G)]序列在溶液中呈现出11.1碱基对的螺旋重复结构,并且在正确定相时会导致DNA轻微弯曲。

Oligo[d(C).(G)] runs exhibit a helical repeat of 11.1 bp in solution and cause slight DNA curvature when properly phased.

作者信息

Biburger M, Niederweis M, Hillen W

机构信息

Institut für Mikrobiologie und Biochemie, Friedrich-Alexander Universität Erlangen-Nürnberg, Germany.

出版信息

Nucleic Acids Res. 1994 May 11;22(9):1562-6. doi: 10.1093/nar/22.9.1562.

Abstract

We have inserted d(C)10 in a set of DNA fragments with bent segments on both ends, which are rotated with respect to each other by base pair wise increasing insertions. The electrophoretic mobilities on polyacrylamide gels of these DNA fragments were used to identify insertion sizes with cis conformations of the bent ends. These experiments revealed a helical repeat in solution of d(C).d(G) tracts of 11.1 +/- 0.08 bp. The electrophoretic mobilities of ligation ladders with properly phased d(C)5 and d(C)16 runs demonstrate a small but clearly detectable curvature of these fragments.

摘要

我们已将d(C)10插入到一组两端带有弯曲片段的DNA片段中,这些弯曲片段通过逐个碱基对增加插入而相互旋转。利用这些DNA片段在聚丙烯酰胺凝胶上的电泳迁移率来确定弯曲末端顺式构象的插入大小。这些实验揭示了d(C).d(G)序列在溶液中的螺旋重复周期为11.1±0.08 bp。具有正确相位的d(C)5和d(C)16连接梯的电泳迁移率表明这些片段存在微小但明显可检测到的曲率。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2516/308030/5676ed5dd652/nar00033-0061-a.jpg

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