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美国纽约阿迪朗达克山脉含泥炭藓泥炭地的泥炭类型与微生物生态之间的关系。

Relationship Between Peat Type and Microbial Ecology in Sphagnum-Containing Peatlands of the Adirondack Mountains, NY, USA.

机构信息

School of Civil and Environmental Engineering, Cornell University, Ithaca, NY, 14853, USA.

出版信息

Microb Ecol. 2021 Aug;82(2):429-441. doi: 10.1007/s00248-020-01651-1. Epub 2021 Jan 7.

DOI:10.1007/s00248-020-01651-1
PMID:33410936
Abstract

Peatland microbial community composition varies with respect to a range of biological and physicochemical variables. While the extent of peat degradation (humification) has been linked to microbial community composition along vertical stratification gradients within peatland sites, across-site variations have been relatively unexplored. In this study, we compared microbial communities across ten pristine Sphagnum-containing peatlands in the Adirondack Mountains, NY, which represented three different peat types-humic fen peat, humic bog peat, and fibric bog peat. Using 16S amplicon sequencing and network correlation analysis, we demonstrate that microbial community composition is primarily linked to peat type, and that distinct taxa networks distinguish microbial communities in each type. Shotgun metagenomic sequencing of the active water table region (mesotelm) from two Sphagnum-dominated bogs-one with fibric peat and one with humic peat-revealed differences in primary carbon degradation pathways, with the fibric peat being dominated by carbohydrate metabolism and hydrogenotrophic methanogenesis, and the humic peat being dominated by aliphatic carbon metabolism and aceticlastic methanogenesis. Our results suggest that peat humification is a major factor driving microbial community dynamics across peatland ecosystems.

摘要

泥炭地微生物群落组成随一系列生物和物理化学变量而变化。虽然泥炭降解(腐殖化)的程度与泥炭地垂直分层梯度内的微生物群落组成有关,但站点间的变化相对较少被探索。在这项研究中,我们比较了纽约阿迪朗达克山脉的十个原始含泥炭藓泥炭地的微生物群落,这些泥炭地代表了三种不同的泥炭类型——腐殖质沼泽泥炭、腐殖质泥炭和纤维泥炭。使用 16S 扩增子测序和网络相关分析,我们表明微生物群落组成主要与泥炭类型有关,并且不同的分类网络区分了每种类型的微生物群落。对两个以泥炭藓为主的沼泽的活动地下水位区(mesotelm)进行的宏基因组测序——一个是纤维泥炭,另一个是腐殖质泥炭——揭示了主要碳降解途径的差异,纤维泥炭以碳水化合物代谢和氢营养型甲烷生成为主,腐殖质泥炭以脂肪碳代谢和乙酸营养型甲烷生成为主。我们的结果表明,泥炭腐殖化是驱动泥炭地生态系统中微生物群落动态的主要因素。

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本文引用的文献

1
Peatland Microbial Community Composition Is Driven by a Natural Climate Gradient.泥炭地微生物群落组成受自然气候梯度驱动。
Microb Ecol. 2020 Oct;80(3):593-602. doi: 10.1007/s00248-020-01510-z. Epub 2020 May 9.
2
Genome-centric view of carbon processing in thawing permafrost.以基因组为中心的视角看待永冻层解冻过程中的碳处理。
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KBase: The United States Department of Energy Systems Biology Knowledgebase.KBase:美国能源部系统生物学知识库。
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4
Molecular composition of raw peat and humic substances from permafrost peat soils of European Northeast Russia as climate change markers.俄罗斯欧洲东北部永冻泥炭土中原始泥炭和腐殖物质的分子组成作为气候变化的标志物。
Sci Total Environ. 2018 Feb 15;615:1229-1238. doi: 10.1016/j.scitotenv.2017.10.053. Epub 2017 Oct 17.
5
Electron-Donating Phenolic and Electron-Accepting Quinone Moieties in Peat Dissolved Organic Matter: Quantities and Redox Transformations in the Context of Peat Biogeochemistry.泥炭中含电子供体的酚类和含电子受体的醌类物质:在泥炭生物地球化学背景下的数量和氧化还原转化。
Environ Sci Technol. 2018 May 1;52(9):5236-5245. doi: 10.1021/acs.est.8b00594. Epub 2018 Apr 10.
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Molybdenum-Based Diazotrophy in a Sphagnum Peatland in Northern Minnesota.明尼苏达州北部泥炭藓泥炭地中基于钼的固氮作用。
Appl Environ Microbiol. 2017 Aug 17;83(17). doi: 10.1128/AEM.01174-17. Print 2017 Sep 1.
7
Distribution of Bathyarchaeota Communities Across Different Terrestrial Settings and Their Potential Ecological Functions.底栖古菌群落在不同陆地生境中的分布及其潜在生态功能。
Sci Rep. 2017 Mar 21;7:45028. doi: 10.1038/srep45028.
8
Identification of microbial populations driving biopolymer degradation in acidic peatlands by metatranscriptomic analysis.通过宏转录组分析鉴定驱动酸性泥炭地生物聚合物降解的微生物种群。
Mol Ecol. 2016 Oct;25(19):4818-35. doi: 10.1111/mec.13806. Epub 2016 Sep 18.
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Fast and sensitive protein alignment using DIAMOND.使用 DIAMOND 进行快速灵敏的蛋白质比对。
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10
Microbial metabolic potential for carbon degradation and nutrient (nitrogen and phosphorus) acquisition in an ombrotrophic peatland.在一个雨养泥炭地中微生物对碳降解和养分(氮和磷)获取的代谢潜力。
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