Suppr超能文献

进行成功的 DNA 指纹图谱分析需要多少个细胞?

How many cells are required for successful DNA profiling?

机构信息

College of Science & Engineering, Flinders University, Adelaide, 5042, Australia.

College of Science & Engineering, Flinders University, Adelaide, 5042, Australia; Forensic Science SA, GPO Box 2790, Adelaide, Australia.

出版信息

Forensic Sci Int Genet. 2021 Mar;51:102453. doi: 10.1016/j.fsigen.2020.102453. Epub 2021 Jan 7.

Abstract

Through advances in fluorescent nucleic acid dye staining and visualisation, targeted collection of cellular material deposited, for example by touch or within a saliva deposit, is possible. In regard to the potential evidentiary value of the deposit the questions remain: 'How many cells are required to generate an informative DNA profile?'; 'How many visualised corneocytes within a touch deposit compared to typical nucleated cells are required in order to achieve successful DNA profiling?'. Diamond TM Nucleic Acid Dye (DD) staining of cellular material, and subsequent visualisation utilising portable fluorescence microscopy, was performed for touch and saliva samples to target defined numbers of cells for collection, by swab and tapelift, and subsequent processing via direct PCR and PCR post-extraction. The resulting DNA quantification data and alleles generated within subsequent DNA profiles could be correlated to the number of cells initially collected to determine cellular threshold requirements for DNA profile generation for each workflow. Full profiles were consistently generated using direct PCR when the template was ≥40 buccal cells collected by either a swab or tapelift. By contrast ≥800 corneocytes collected by swabbing or ≥4,000 corneocytes collected by a tapelift were required to generate same number of STR alleles from touch samples. When samples were processed through a DNA extraction workflow, ≥80 buccal cells were required to generate full profiles from both swab and tapelift, while touch samples required ≥4,000 corneocytes collected by a swab and >8,000 corneocytes collected by a tapelift. The data presented within this study allow for informative sample triage and workflow decisions to be made to optimise STR amplification based on the presence and visual quantification of stained cellular material.

摘要

通过荧光核酸染料染色和可视化技术的进步,可以对沉积的细胞物质进行靶向收集,例如通过触摸或在唾液沉积中收集。关于沉积的潜在证据价值,仍然存在以下问题:“需要多少个细胞才能生成有信息的 DNA 图谱?”;“为了成功进行 DNA 图谱分析,与典型有核细胞相比,触摸沉积物中需要多少个可视化的角蛋白细胞才能实现?”。对触摸和唾液样本进行了 DiamondTM 核酸染料(DD)染色的细胞物质,以及利用便携式荧光显微镜进行的后续可视化,以靶向收集特定数量的细胞,通过拭子和胶带提拉,以及随后通过直接 PCR 和 PCR 提取后处理。可以将产生的 DNA 定量数据和等位基因与最初收集的细胞数量相关联,以确定每个工作流程生成 DNA 图谱的细胞阈值要求。当模板通过拭子或胶带提拉收集的口腔细胞数≥40 个时,直接 PCR 始终可以生成完整的图谱。相比之下,从触摸样本中生成相同数量的 STR 等位基因需要收集≥800 个角蛋白细胞或≥4000 个角蛋白细胞。当样本通过 DNA 提取工作流程处理时,通过拭子或胶带提拉收集的口腔细胞数≥80 个时,即可从拭子和胶带提拉生成完整的图谱,而触摸样本需要收集≥4000 个角蛋白细胞或收集≥8000 个角蛋白细胞。本研究中提供的数据允许对样本进行有意义的分类,并根据染色细胞物质的存在和可视化定量做出工作流程决策,以优化 STR 扩增。

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验