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利用外显子组测序分析鉴定家族性斜视的潜在风险变异。

Identification of Possible Risk Variants of Familial Strabismus Using Exome Sequencing Analysis.

机构信息

Department of Biosystems and Biomedical Sciences, College of Health Sciences, Korea University, Seoul 02841, Korea.

Department of Ophthalmology, Seoul National University College of Medicine, Seoul 03080, Korea.

出版信息

Genes (Basel). 2021 Jan 10;12(1):75. doi: 10.3390/genes12010075.

Abstract

PURPOSE

To investigate candidate genes associated with familial strabismus and propose a theory of their interaction in familial strabismus associated with early neurodevelopment.

METHODS

Eighteen families, including 53 patients diagnosed with strabismus and 34 unaffected family members, were analyzed. All patients with strabismus and available unaffected family members were evaluated using whole exome sequencing. The primary outcome was to identify rare occurring variants among affected individuals and investigate the evidence of their genetic heterogeneity. These results were compared with exome sequencing analysis to build a comprehensive genetic profile of the study families.

RESULTS

We observed 60 variants from 58 genes in 53 patients diagnosed with strabismus. We prioritized the most credible risk variants, which showed clear segregation in family members affected by strabismus. As a result, we found risk variants in four genes (, , and ) in five families, suggesting their role in development of familial strabismus. In other families, there were several rare genetic variants in affected cases, but we did not find clear segregation pattern across family members.

CONCLUSION

Genomic sequencing holds great promise in elucidating the genetic causes of strabismus; further research with larger cohorts or other related approaches are warranted.

摘要

目的

研究与家族性斜视相关的候选基因,并提出与早期神经发育相关的家族性斜视的基因相互作用理论。

方法

对 18 个家系(包括 53 例斜视患者和 34 名无斜视家族成员)进行分析。对所有斜视患者和可获得的无斜视家族成员进行全外显子组测序。主要结局是鉴定受累个体中罕见发生的变异,并探讨其遗传异质性的证据。将这些结果与外显子组测序分析进行比较,以构建研究家系的综合遗传图谱。

结果

我们在 53 例斜视患者中观察到 58 个基因的 60 个变异。我们对最可信的风险变异进行了优先级排序,这些变异在受斜视影响的家族成员中显示出明确的分离。结果发现,在 5 个家系的 4 个基因(、、和)中存在风险变异,提示其在家族性斜视的发生发展中起作用。在其他家系中,受累病例中存在几种罕见的遗传变异,但我们没有发现家族成员之间明显的分离模式。

结论

基因组测序在阐明斜视的遗传病因方面具有广阔的前景;需要进一步的研究,包括更大的队列或其他相关方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bf15/7827096/373d736c178e/genes-12-00075-g001.jpg

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