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一种用于单粒子成像验证的加密-解密框架。

An encryption-decryption framework to validating single-particle imaging.

机构信息

Centre for Bio-imaging Sciences, National University of Singapore, 14 Science Drive 4, 117557, Singapore, Singapore.

Department of Physics, National University of Singapore, 2 Science Drive 3, 117551, Singapore, Singapore.

出版信息

Sci Rep. 2021 Jan 13;11(1):971. doi: 10.1038/s41598-020-79589-0.

Abstract

We propose an encryption-decryption framework for validating diffraction intensity volumes reconstructed using single-particle imaging (SPI) with X-ray free-electron lasers (XFELs) when the ground truth volume is absent. This conceptual framework exploits each reconstructed volumes' ability to decipher latent variables (e.g. orientations) of unseen sentinel diffraction patterns. Using this framework, we quantify novel measures of orientation disconcurrence, inconsistency, and disagreement between the decryptions by two independently reconstructed volumes. We also study how these measures can be used to define data sufficiency and its relation to spatial resolution, and the practical consequences of focusing XFEL pulses to smaller foci. This conceptual framework overcomes critical ambiguities in using Fourier Shell Correlation (FSC) as a validation measure for SPI. Finally, we show how this encryption-decryption framework naturally leads to an information-theoretic reformulation of the resolving power of XFEL-SPI, which we hope will lead to principled frameworks for experiment and instrument design.

摘要

我们提出了一种加密-解密框架,用于验证使用单粒子成像(SPI)和 X 射线自由电子激光(XFEL)重建的衍射强度体积,当不存在真实体积时。这个概念框架利用每个重建体积解码未见过的示踪衍射图案的潜在变量(例如取向)的能力。使用这个框架,我们量化了两个独立重建体积之间的取向不一致、不一致和不同意的新度量。我们还研究了如何使用这些度量来定义数据充足性及其与空间分辨率的关系,以及将 XFEL 脉冲聚焦到更小焦点的实际后果。这个概念框架克服了使用傅里叶壳相关(FSC)作为 SPI 验证度量的关键模糊性。最后,我们展示了这种加密-解密框架如何自然地导致 XFEL-SPI 分辨率的信息论重新表述,我们希望这将为实验和仪器设计带来原则性框架。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bd5d/7806625/0a262cd0b666/41598_2020_79589_Fig1_HTML.jpg

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