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从头算 QM/MM 计算中长程静电的简化电荷投影方案。

A simplified charge projection scheme for long-range electrostatics in ab initio QM/MM calculations.

机构信息

Department of Chemistry and Biochemistry, University of Oklahoma, 101 Stephenson Pkwy, Norman, Oklahoma 73019, USA.

Department of Chemistry and Biochemistry, University of Texas at Arlington, Arlington, Texas 76019, USA.

出版信息

J Chem Phys. 2021 Jan 14;154(2):024115. doi: 10.1063/5.0038120.

Abstract

In a previous work [Pan et al., Molecules 23, 2500 (2018)], a charge projection scheme was reported, where outer molecular mechanical (MM) charges [>10 Å from the quantum mechanical (QM) region] were projected onto the electrostatic potential (ESP) grid of the QM region to accurately and efficiently capture long-range electrostatics in ab initio QM/MM calculations. Here, a further simplification to the model is proposed, where the outer MM charges are projected onto inner MM atom positions (instead of ESP grid positions). This enables a representation of the long-range MM electrostatic potential via augmentary charges (AC) on inner MM atoms. Combined with the long-range electrostatic correction function from Cisneros et al. [J. Chem. Phys. 143, 044103 (2015)] to smoothly switch between inner and outer MM regions, this new QM/MM-AC electrostatic model yields accurate and continuous ab initio QM/MM electrostatic energies with a 10 Å cutoff between inner and outer MM regions. This model enables efficient QM/MM cluster calculations with a large number of MM atoms as well as QM/MM calculations with periodic boundary conditions.

摘要

在之前的工作中[Pan 等人,Molecules 23, 2500 (2018)],报道了一种电荷投影方案,其中外部分子力学(MM)电荷(距离量子力学(QM)区域>10 Å)被投影到 QM 区域的静电势(ESP)网格上,以在从头算 QM/MM 计算中准确有效地捕获长程静电。在这里,提出了该模型的进一步简化,其中外部 MM 电荷被投影到内部 MM 原子位置(而不是 ESP 网格位置)。这使得可以通过内 MM 原子上的附加电荷 (AC) 来表示长程 MM 静电势。与 Cisneros 等人的长程静电校正函数[J. Chem. Phys. 143, 044103 (2015)]相结合,以在内外 MM 区域之间平滑切换,这种新的 QM/MM-AC 静电模型在外 MM 区域之间使用 10 Å 截止值产生准确且连续的从头算 QM/MM 静电能。该模型能够实现具有大量 MM 原子的高效 QM/MM 簇计算以及具有周期性边界条件的 QM/MM 计算。

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