Department of Chemistry and Biochemistry, University of Oklahoma, 101 Stephenson Pkwy, Norman, Oklahoma 73019, USA.
Department of Chemistry and Biochemistry, University of Texas at Arlington, Arlington, Texas 76019, USA.
J Chem Phys. 2021 Jan 14;154(2):024115. doi: 10.1063/5.0038120.
In a previous work [Pan et al., Molecules 23, 2500 (2018)], a charge projection scheme was reported, where outer molecular mechanical (MM) charges [>10 Å from the quantum mechanical (QM) region] were projected onto the electrostatic potential (ESP) grid of the QM region to accurately and efficiently capture long-range electrostatics in ab initio QM/MM calculations. Here, a further simplification to the model is proposed, where the outer MM charges are projected onto inner MM atom positions (instead of ESP grid positions). This enables a representation of the long-range MM electrostatic potential via augmentary charges (AC) on inner MM atoms. Combined with the long-range electrostatic correction function from Cisneros et al. [J. Chem. Phys. 143, 044103 (2015)] to smoothly switch between inner and outer MM regions, this new QM/MM-AC electrostatic model yields accurate and continuous ab initio QM/MM electrostatic energies with a 10 Å cutoff between inner and outer MM regions. This model enables efficient QM/MM cluster calculations with a large number of MM atoms as well as QM/MM calculations with periodic boundary conditions.
在之前的工作中[Pan 等人,Molecules 23, 2500 (2018)],报道了一种电荷投影方案,其中外部分子力学(MM)电荷(距离量子力学(QM)区域>10 Å)被投影到 QM 区域的静电势(ESP)网格上,以在从头算 QM/MM 计算中准确有效地捕获长程静电。在这里,提出了该模型的进一步简化,其中外部 MM 电荷被投影到内部 MM 原子位置(而不是 ESP 网格位置)。这使得可以通过内 MM 原子上的附加电荷 (AC) 来表示长程 MM 静电势。与 Cisneros 等人的长程静电校正函数[J. Chem. Phys. 143, 044103 (2015)]相结合,以在内外 MM 区域之间平滑切换,这种新的 QM/MM-AC 静电模型在外 MM 区域之间使用 10 Å 截止值产生准确且连续的从头算 QM/MM 静电能。该模型能够实现具有大量 MM 原子的高效 QM/MM 簇计算以及具有周期性边界条件的 QM/MM 计算。