GEMA Center for Genomics, Ecology and Environment, Faculty of Sciences, Universidad Mayor, 8580745, Santiago, Chile.
Department of Molecular Genetics and Microbiology, Pontificia Universidad Católica de Chile, Alameda 340, 8331150, Santiago, Chile.
Sci Rep. 2021 Jan 14;11(1):1368. doi: 10.1038/s41598-020-80568-8.
Year-round reports of phytoplankton dynamics in the West Antarctic Peninsula are rare and mainly limited to microscopy and/or pigment-based studies. We analyzed the phytoplankton community from coastal waters of Fildes Bay in the West Antarctic Peninsula between January 2014 and 2015 using metabarcoding of the nuclear and plastidial 18/16S rRNA gene from both size-fractionated and flow cytometry sorted samples. Overall 14 classes of photosynthetic eukaryotes were present in our samples with the following dominating: Bacillariophyta (diatoms), Pelagophyceae and Dictyochophyceae for division Ochrophyta, Mamiellophyceae and Pyramimonadophyceae for division Chlorophyta, Haptophyta and Cryptophyta. Each metabarcoding approach yielded a different image of the phytoplankton community with for example Prymnesiophyceae more prevalent in plastidial metabarcodes and Mamiellophyceae in nuclear ones. Diatoms were dominant in the larger size fractions and during summer, while Prymnesiophyceae and Cryptophyceae were dominant in colder seasons. Pelagophyceae were particularly abundant towards the end of autumn (May). In addition of Micromonas polaris and Micromonas sp. clade B3, both previously reported in Arctic waters, we detected a new Micromonas 18S rRNA sequence signature, close to, but clearly distinct from M. polaris, which potentially represents a new clade specific of the Antarctic. These results highlight the need for complementary strategies as well as the importance of year-round monitoring for a comprehensive description of phytoplankton communities in Antarctic coastal waters.
在整个南极半岛,对浮游植物动态的常年报道非常罕见,且主要局限于显微镜观察和/或色素研究。我们利用核和质体 18/16S rRNA 基因的宏条形码技术,对 2014 年 1 月至 2015 年期间南极半岛菲尔德斯湾(Fildes Bay)近岸水域的浮游植物群落进行了分析,这些样本来自于大小分级和流式细胞术分选的样品。在我们的样本中,总共存在 14 类光合真核生物,其中优势类群包括:Bacillariophyta(硅藻)、Pelagophyceae 和 Dictyochophyceae(Ochrophyta 门)、Mamiellophyceae 和 Pyramimonadophyceae(Chlorophyta 门)、Haptophyta 和 Cryptophyta。两种宏条形码方法分别提供了浮游植物群落的不同图像,例如,Prymnesiophyceae 在质体宏条形码中更为普遍,Mamiellophyceae 在核宏条形码中更为普遍。硅藻在较大的粒径中占优势,且在夏季最为丰富,而Prymnesiophyceae 和 Cryptophyceae 在较冷的季节占优势。Pelagophyceae 在秋季末(5 月)特别丰富。除了已在北极水域报道过的 Micromonas polaris 和 Micromonas sp. clade B3 之外,我们还检测到一个新的 Micromonas 18S rRNA 序列特征,与 M. polaris 接近,但明显不同,可能代表南极特有的一个新的分支。这些结果突出了互补策略的必要性,以及全年监测对全面描述南极近岸水域浮游植物群落的重要性。