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(龙胆科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Gentianaceae).

作者信息

Yang Zhen, Yan Jinyan, Zhu Guoyu

机构信息

Key Laboratory of Bio-Resource and Eco-Environment of Ministry of Education, College of Life Sciences, Sichuan University, Chengdu, Sichuan, P. R. China.

Aba Vocational College, Mao County, Sichuan, P. R. China.

出版信息

Mitochondrial DNA B Resour. 2020 Jul 11;5(3):2763-2764. doi: 10.1080/23802359.2020.1788447.

DOI:10.1080/23802359.2020.1788447
PMID:33457940
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7782097/
Abstract

, a traditional Chinese medicine, is widely used to treat jaundice hepatitis, dysentery, dyspepsia, etc. The plastome is 153,691 bp in length, with one large single copy region of 83,860 bp, one small single copy region of 18,301 bp, and two inverted repeat (IR) regions of 25,765 bp. It contains 134 genes, including 84 protein-coding genes, 8 ribosomal RNA, and 37 transfer RNA. Phylogenetic tree shows that is a sister species to . The complete chloroplast genome could provide genetic information of this species would contribute to the formulation of protection strategy.

摘要

一种传统中药,被广泛用于治疗黄疸型肝炎、痢疾、消化不良等。其质体基因组长度为153,691 bp,有一个83,860 bp的大单拷贝区域、一个18,301 bp的小单拷贝区域以及两个25,765 bp的反向重复(IR)区域。它包含134个基因,包括84个蛋白质编码基因、8个核糖体RNA和37个转运RNA。系统发育树显示[物种名称]是[另一物种名称]的姐妹物种。完整的叶绿体基因组可以提供该物种的遗传信息,这将有助于制定保护策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa37/7782097/457bd98951d8/TMDN_A_1788447_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa37/7782097/457bd98951d8/TMDN_A_1788447_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aa37/7782097/457bd98951d8/TMDN_A_1788447_F0001_C.jpg

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本文引用的文献

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NOVOPlasty: de novo assembly of organelle genomes from whole genome data.NOVOPlasty:从头组装细胞器基因组的全基因组数据。
Nucleic Acids Res. 2017 Feb 28;45(4):e18. doi: 10.1093/nar/gkw955.
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Plann: A command-line application for annotating plastome sequences.Plann:一个用于注释质体基因组序列的命令行应用程序。
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