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鉴定黑素细胞氧化应激损伤中的竞争内源性 RNA 网络。

Identification of the Competing Endogenous RNA Networks in Oxidative Stress Injury of Melanocytes.

机构信息

Department of Dermatology, Third Xiangya Hospital, Central South University, Changsha, China.

Institute of Chinese Materia Medica, Hunan Academy of Chinese Medicine, Changsha, China.

出版信息

DNA Cell Biol. 2021 Feb;40(2):192-208. doi: 10.1089/dna.2020.5455. Epub 2021 Jan 20.

Abstract

Competing endogenous RNAs (ceRNAs), including long noncoding RNA (lncRNA), circular RNA (circRNA), pseudogenes, synthetic miRNA inhibitors, etc. are classes of RNAs that can compete and interact with each other within an organism. There are regions in these RNAs that can be bound by messenger-RNA-interfering complementary RNA (microRNA), called microRNA response elements (MREs). These RNAs compete with each other to combine complementary microRNAs and MREs to form ceRNA regulatory mechanisms and participate in the regulation of many biological processes. The oxidative stress injury of melanocytes is one of the crucial mechanisms of vitiligo. However, it is unclear whether the ceRNA regulation mechanism is involved in the oxidative stress injury of melanocytes. The purpose of this study is to explore the changes of messenger RNA (mRNA), lncRNAs, and circRNAs in melanocytes under oxidative stress and to identify the key ceRNA regulatory networks. Compared with the normal cells, the chip detection of ceRNA expression profile showed that the expression of 491 mRNAs, 865 lncRNAs, and 1161 circRNAs were altered more than fivefold during the oxidative stress injury of melanocytes. The oxidative stress-related genes (, , , , , and ), cell cycle-related genes (, , , , and ), and apoptosis-related gene () were identified in the formation of ceRNA regulation networks with lncRNAs and circRNAs, which shares the common MREs. Further verification found that LNCV6_120941_PI430048170 or hsa_circ_0048910 might regulate the expression of by sponging hsa-miR-4755-3p, LNCV6_119109_PI430048170, or hsa_circ_0048909 might regulate the expression of by sponging hsa-miR-6721-5p in the oxidative stress injury of melanocytes. In conclusion, complex changes of the ceRNA regulatory network in the oxidative stress response of melanocytes are evident. Oxidative stress may mediate melanocyte injury through the ceRNA regulation mechanism and induce the pathogenesis of vitiligo.

摘要

竞争内源性 RNA(ceRNA),包括长非编码 RNA(lncRNA)、环状 RNA(circRNA)、假基因、合成 miRNA 抑制剂等,是一类在生物体内可以相互竞争和相互作用的 RNA。这些 RNA 中有一些区域可以与信使 RNA 干扰互补 RNA(microRNA)结合,称为 microRNA 反应元件(MRE)。这些 RNA 相互竞争,结合互补的 microRNA 和 MRE,形成 ceRNA 调控机制,参与许多生物过程的调控。黑素细胞的氧化应激损伤是白癜风发病的关键机制之一。然而,ceRNA 调控机制是否参与黑素细胞的氧化应激损伤尚不清楚。本研究旨在探讨氧化应激下黑素细胞中信使 RNA(mRNA)、lncRNA 和 circRNA 的变化,并鉴定关键的 ceRNA 调控网络。与正常细胞相比,芯片检测 ceRNA 表达谱显示,氧化应激损伤黑素细胞时,491 个 mRNAs、865 个 lncRNAs 和 1161 个 circRNAs 的表达变化超过五倍。在 lncRNA 和 circRNA 形成的 ceRNA 调控网络中鉴定到与氧化应激相关的基因(、、、、和)、细胞周期相关基因(、、、和)和凋亡相关基因(),它们共享共同的 MRE。进一步验证发现,LNCV6_120941_PI430048170 或 hsa_circ_0048910 可能通过海绵吸附 hsa-miR-4755-3p 来调节 的表达,LNCV6_119109_PI430048170 或 hsa_circ_0048909 可能通过海绵吸附 hsa-miR-6721-5p 来调节 的表达,在黑素细胞的氧化应激损伤中。综上所述,氧化应激反应中 ceRNA 调控网络的复杂变化是明显的。氧化应激可能通过 ceRNA 调控机制介导黑素细胞损伤,诱导白癜风的发病机制。

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