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基于完整线粒体基因组揭示入侵物种美洲水貂的进化地位

Evolutionary status of the invasive American mink revealed by complete mitochondrial genome.

作者信息

Hua Yan, Xu Yanchun

机构信息

College of Wildlife Resources, Northeast Forestry University, Harbin, P.R. China.

出版信息

Mitochondrial DNA B Resour. 2016 Feb 1;1(1):6-7. doi: 10.1080/23802359.2015.1137794.

DOI:10.1080/23802359.2015.1137794
PMID:33473387
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7799575/
Abstract

The American mink, , is native to North America and listed as one of the most widely distributed invasive species into the Eurasian mainland. Even though facing serious over-hunting and habitat degradation problems, this species has successfully dispersed into most areas of northeast China in the past decades, which may have a huge impact on local species composition and structure. We determined and annotated the whole mitochondrial DNA genome of the American mink to better understand the evolutionary relationship of this invasive species with other distributing in China. The complete mitogenome is 16 627 bp in length, includes 13 protein-coding genes, 22 tRNA genes, 2 rRNA genes and one control region. We built the phylogenetic tree of American mink and other 10 most closely species.

摘要

美洲水貂原产于北美洲,被列为入侵欧亚大陆分布最广泛的物种之一。尽管面临严重的过度捕猎和栖息地退化问题,但在过去几十年里,该物种已成功扩散到中国东北的大部分地区,这可能会对当地物种的组成和结构产生巨大影响。我们测定并注释了美洲水貂的全线粒体DNA基因组,以更好地了解这种入侵物种与在中国分布的其他水貂的进化关系。完整的线粒体基因组长度为16627bp,包括13个蛋白质编码基因、22个tRNA基因、2个rRNA基因和一个控制区。我们构建了美洲水貂与其他10种亲缘关系最近的水貂物种的系统发育树。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/7799575/723f664f885d/TMDN_A_1137794_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/7799575/723f664f885d/TMDN_A_1137794_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aabd/7799575/723f664f885d/TMDN_A_1137794_F0001_B.jpg

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本文引用的文献

1
MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.MEGA6:分子进化遗传学分析版本 6.0。
Mol Biol Evol. 2013 Dec;30(12):2725-9. doi: 10.1093/molbev/mst197. Epub 2013 Oct 16.
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On the phylogeny of Mustelidae subfamilies: analysis of seventeen nuclear non-coding loci and mitochondrial complete genomes.鼬科亚科的系统发育:十七个核非编码基因座和线粒体全基因组分析。
BMC Evol Biol. 2011 Apr 10;11:92. doi: 10.1186/1471-2148-11-92.
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Multigene phylogeny of the Mustelidae: resolving relationships, tempo and biogeographic history of a mammalian adaptive radiation.
鼬科的多基因系统发育:解析哺乳动物适应性辐射的亲缘关系、演化速率和生物地理历史。
BMC Biol. 2008 Feb 14;6:10. doi: 10.1186/1741-7007-6-10.