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药用植物的完整叶绿体基因组:基因组特征与系统发育分析

Complete chloroplast genome of medicinal plant : genome characterization and phylogenetic analysis.

作者信息

Gao Jihai, Zhang Dayan, Wang Wei, Peng Cheng

机构信息

Pharmacy College, Chengdu University of Traditional Chinese Medicine, The Ministry of Education Key Laboratory of Standardization of Chinese Herbal Medicine, Key Laboratory of Systematic Research, Development and Utilization of Chinese Medicine Resources in Sichuan Province-Key Laboratory Breeding Base of Co-founded by Sichuan Province and MOST, Chengdu, China.

出版信息

Mitochondrial DNA B Resour. 2016 Dec 23;1(1):893-894. doi: 10.1080/23802359.2016.1258342.

DOI:10.1080/23802359.2016.1258342
PMID:33473669
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800505/
Abstract

The complete chloroplast genome sequence of an important medicinal plant of the family Ranunculaceae, Debx., was characterized in this study. The assembled chloroplast genome was 154,776 bp in length, which included a large single-copy (LSC), a small single-copy (SSC), and two inverted repeat (IR) regions of 86,330bp, 15,986 bp, and 26,193 bp, respectively. The GC content of the genome was 38.1%. Phylogenetic analysis with the whole nucleotide sequences of reported chloroplast genomes indicated a close relationship of with .

摘要

本研究对毛茛科一种重要药用植物——(此处原文缺失具体植物学名)的完整叶绿体基因组序列进行了表征。组装后的叶绿体基因组长度为154,776 bp,其中包括一个86,330 bp的大单拷贝(LSC)区域、一个15,986 bp的小单拷贝(SSC)区域和两个分别为26,193 bp的反向重复(IR)区域。该基因组的GC含量为38.1%。对已报道的叶绿体基因组全核苷酸序列进行的系统发育分析表明(此处原文缺失具体比较对象)与(此处原文缺失具体比较对象)关系密切。

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本文引用的文献

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The complete chloroplast genome of Aconitum chiisanense Nakai (Ranunculaceae).千山野乌头(毛茛科)的完整叶绿体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2017 Jan;28(1):75-76. doi: 10.3109/19401736.2015.1110805. Epub 2015 Dec 28.
2
Complete plastome sequence of Thalictrum coreanum (Ranunculaceae) and transfer of the rpl32 gene to the nucleus in the ancestor of the subfamily Thalictroideae.朝鲜唐松草(毛茛科)完整的质体基因组序列和 rpl32 基因在唐松草亚科祖先中的核转移。
BMC Plant Biol. 2015 Feb 5;15:40. doi: 10.1186/s12870-015-0432-6.
3
Cardioactive C₁₉-diterpenoid alkaloids from the lateral roots of Aconitum carmichaeli "Fu Zi".
来源于附子(乌头侧根)的具有强心活性的C₁₉-二萜生物碱。
Chem Pharm Bull (Tokyo). 2012;60(1):144-9. doi: 10.1248/cpb.60.144.
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Identification of the medicinal plants in Aconitum L. by DNA barcoding technique.利用 DNA 条形码技术鉴定乌头属中的药用植物。
Planta Med. 2010 Oct;76(14):1622-8. doi: 10.1055/s-0029-1240967. Epub 2010 Mar 9.
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Studies on the constituents of Aconitum species. IX. The pharmacological properties of pyro-type aconitine alkaloids, components of processed aconite powder 'kako-bushi-matsu': analgesic, antiinflammatory and acute toxic activities.乌头属植物成分的研究。IX. 制草乌粉末“kako-bushi-matsu”的成分焦型乌头碱生物碱的药理特性:镇痛、抗炎及急性毒性活性。
J Ethnopharmacol. 1991 Dec;35(2):159-64. doi: 10.1016/0378-8741(91)90068-o.