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Complete mitochondrial genome of an undescribed gnomefish of the genus (Teleostei, Scombropidae) from southern waters off Kyushu Island, Japan.

作者信息

Mochizuki Yukako, Yamada Riko, Shishido Hirotoshi, Masuda Yasuji, Nakai Shizuko, Takai Noriyuki, Itoi Shiro, Sugita Haruo

机构信息

Department of Marine Science and Resources, Nihon University, Fujisawa, Kanagawa, Japan.

Kagoshima Prefectural Fisheries Technology and Development Center, Ibusuki, Kagoshima, Japan.

出版信息

Mitochondrial DNA B Resour. 2017 Feb 16;2(1):106-108. doi: 10.1080/23802359.2017.1289348.

DOI:10.1080/23802359.2017.1289348
PMID:33473732
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7799919/
Abstract

The complete mitochondrial genome of an undescribed gnomefish species of the genus was determined using a PCR-based method. The total length of mitochondrial DNA (mtDNA) was 16,521 bp, and included 13 protein-coding genes, two ribosomal RNA (rRNA) genes, 22 transfer RNA (tRNA) genes and one control region. The mitochondrial gene arrangement of this gnomefish species was identical to that of two previously described scombropid species, and , and also to those of other teleosts. Maximum likelihood analysis showed that the undescribed scombropid species is most closely related to .

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/219a/7799919/cbf3a5d624e3/TMDN_A_1289348_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/219a/7799919/cbf3a5d624e3/TMDN_A_1289348_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/219a/7799919/cbf3a5d624e3/TMDN_A_1289348_F0001_B.jpg

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引用本文的文献

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2
Phylogenetic position of the Atlantic Gnomefish, (Teleostei: Scombropidae), within the genus , inferred from the sequences of complete mitochondrial genome and cytochrome oxidase subunit I genes.根据线粒体全基因组和细胞色素氧化酶亚基I基因序列推断大西洋侏儒鱼(硬骨鱼纲:魣蜥鱼科)在魣蜥鱼属中的系统发育位置。
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3

本文引用的文献

1
Phylogenetic position of Scombropidae within teleostei: the complete mitochondrial genome of the gnomefish, Scombrops gilberti.鲭鲷科在硬骨鱼纲中的系统发育位置:侏儒鱼(吉尔伯特氏鲭鲷,Scombrops gilberti)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3446-8. doi: 10.3109/19401736.2015.1063135. Epub 2015 Jul 8.
2
The complete mitochondrial genome of the gnomefish Scombrops boops (Teleostei, Perciformes, Scombropidae) from the Pacific Ocean off the Japanese Islands.
Mitochondrial DNA A DNA Mapp Seq Anal. 2016;27(1):785-6. doi: 10.3109/19401736.2014.987242. Epub 2014 Dec 8.
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中国特有淡水虾虎鱼的线粒体全基因组及系统发育地位
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MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline.MitoFish 和 MitoAnnotator:鱼类线粒体基因组数据库,具有准确和自动的注释管道。
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Population genetic structure of Scombrops boops (Percoid, Scombropidae) around the Japanese archipelago inferred from the cytochrome b gene sequence in mitochondrial DNA.基于线粒体DNA细胞色素b基因序列推断日本列岛周边竹荚鱼(鲈形目,竹荚鱼科)的种群遗传结构
Mitochondrial DNA. 2012 Jun;23(3):223-9. doi: 10.3109/19401736.2012.668897.
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Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.使用 Clustal Omega 快速、可扩展地生成高质量蛋白质多重序列比对。
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Distribution and species composition of juvenile and adult scombropids (Teleostei, Scombropidae) in Japanese coastal waters.日本沿海水域幼鱼和成年竹荚鱼(硬骨鱼纲,竹荚鱼科)的分布和种类组成。
J Fish Biol. 2010 Feb;76(2):369-78. doi: 10.1111/j.1095-8649.2009.02493.x.
8
Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences.硬骨鱼高级系统发育的主要模式:基于100个完整线粒体DNA序列的新视角。
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