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百合科(Liliaceae)某植物的完整质体基因组序列

The complete plastome sequence of (Liliaceae).

作者信息

Kim Hyoung Tae, Lim Ki-Byung

机构信息

Department of Horticulture, Kyungpook National University, Daegu, Republic of Korea.

Institute of Agricultural Science and Technology, Kyungpook National University, Daegu, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2017 Dec 20;3(1):30-31. doi: 10.1080/23802359.2017.1419090.

Abstract

The flower shape of L. is different from that of the other European lilies. The phylogenetic position of the plant has been changed frequently. In the present study, we have sequenced the complete plastome of . The plastome sequence was 152,686 bp long, with a large single copy (LSC) region of 82,083 bp, a small single copy (SSC) region of 17,619 bp, and two inverted repeat (IR) regions of 26,492 bp each. It contained 133 genes, including 83 coding genes, 8 ribosomal RNAs, 38 transfer RNAs, and 4 pseudogenes. The GC contents of LSC, SSC, and IT were 34.8%, 30.7%, and 42.5%, respectively, corresponding to 37.0% of the total GC content. The phylogenetic position of was closely related to the north-eastern lilies.

摘要

L.的花形与其他欧洲百合不同。该植物的系统发育位置频繁变化。在本研究中,我们对L.的完整叶绿体基因组进行了测序。叶绿体基因组序列长152,686 bp,有一个82,083 bp的大单拷贝(LSC)区域、一个17,619 bp的小单拷贝(SSC)区域和两个各为26,492 bp的反向重复(IR)区域。它包含133个基因,包括83个编码基因、8个核糖体RNA、38个转运RNA和4个假基因。LSC、SSC和IR的GC含量分别为34.8%、30.7%和42.5%,占总GC含量的37.0%。L.的系统发育位置与东北百合密切相关。

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