• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

百合科贝母属的完整质体基因组序列。

The complete plastome sequence of Kellogg (Liliaceae).

作者信息

Kim Hyoung Tae, Lim Ki-Byung

机构信息

Department of Horticulture, Kyungpook National University, Daegu, Republic of Korea.

Institute of Agricultural Science and Technology, Kyungpook National University, Daegu, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2018 Jan 11;3(1):120-121. doi: 10.1080/23802359.2018.1424579.

DOI:10.1080/23802359.2018.1424579
PMID:33490490
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800384/
Abstract

Kellogg is native to Western America and grows on slope in high subalpine. In the present study, the complete plastome of was sequenced. The plastome sequence was 151,967 bp long, with a large single copy region of 81,393 bp, a small single copy region of 17,352 bp, and two inverted repeat regions of 26,611 bp each. Total 133 genes were identified, including 83 coding genes, 8 ribosomal RNAs, 38 transfer RNAs, and 4 pseudogenes. Among four pseudogenes, pseudo gene was the first to report among species so far. The phylogenetic position of was sister to but American lilies were not monophyletic.

摘要

凯洛格百合原产于美国西部,生长在亚高山带高处的斜坡上。在本研究中,对其完整的叶绿体基因组进行了测序。叶绿体基因组序列长151,967 bp,有一个81,393 bp的大单拷贝区域、一个17,352 bp的小单拷贝区域以及两个各为26,611 bp的反向重复区域。共鉴定出133个基因,包括83个编码基因、8个核糖体RNA、38个转运RNA和4个假基因。在这4个假基因中,假基因是迄今为止在该物种中首次报道的。凯洛格百合的系统发育位置与某物种是姐妹关系,但美国百合不是单系的。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d334/7800384/5f43a72078f4/TMDN_A_1424579_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d334/7800384/5f43a72078f4/TMDN_A_1424579_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d334/7800384/5f43a72078f4/TMDN_A_1424579_F0001_B.jpg

相似文献

1
The complete plastome sequence of Kellogg (Liliaceae).百合科贝母属的完整质体基因组序列。
Mitochondrial DNA B Resour. 2018 Jan 11;3(1):120-121. doi: 10.1080/23802359.2018.1424579.
2
Complete plastome sequence of Kellogg (Liliaceae).百合科贝母属植物的完整质体基因组序列
Mitochondrial DNA B Resour. 2018 Apr 23;3(2):478-479. doi: 10.1080/23802359.2018.1463826.
3
The complete plastome sequence of (Liliaceae).百合科(Liliaceae)某植物的完整质体基因组序列
Mitochondrial DNA B Resour. 2017 Dec 20;3(1):30-31. doi: 10.1080/23802359.2017.1419090.
4
The complete chloroplast genome of Lilium distichum Nakai (Liliaceae).垂花百合(百合科)的完整叶绿体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4633-4634. doi: 10.3109/19401736.2015.1101591. Epub 2016 Feb 9.
5
Comparative genomics of four Liliales families inferred from the complete chloroplast genome sequence of Veratrum patulum O. Loes. (Melanthiaceae).从白花藜芦(Melanthiaceae)的完整叶绿体基因组序列推断出的四个百合科家族的比较基因组学。
Gene. 2013 Nov 10;530(2):229-35. doi: 10.1016/j.gene.2013.07.100. Epub 2013 Aug 23.
6
The complete chloroplast genome sequence of Lilium hansonii Leichtlin ex D.D.T.Moore.汉森百合(Leichtlin ex D.D.T.Moore)的完整叶绿体基因组序列
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3678-9. doi: 10.3109/19401736.2015.1079852. Epub 2015 Sep 24.
7
The complete chloroplast genome sequence of Gilg (sect. Martagon, Liliaceae).吉尔格(百合科,卷丹组)的叶绿体全基因组序列
Mitochondrial DNA B Resour. 2016 Apr 18;1(1):318-320. doi: 10.1080/23802359.2016.1172043.
8
Complete plastome sequence of (Asparagaceae): a species considered "Vulnerable" in Southeast Asia.天门冬科(Asparagaceae)某物种的完整质体基因组序列:一种在东南亚被视为“易危”的物种。
Mitochondrial DNA B Resour. 2018 May 21;3(2):620-621. doi: 10.1080/23802359.2018.1473740.
9
The complete plastome sequence of Gnetum ula (Gnetales: Gnetaceae).皱叶买麻藤(买麻藤目:买麻藤科)的完整质体基因组序列。
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3721-2. doi: 10.3109/19401736.2015.1079874. Epub 2015 Sep 15.
10
The complete plastome sequence of (Araceae), an ornamental foliage plant.天南星科一种观叶植物(植物名称未给出)的完整质体基因组序列
Mitochondrial DNA B Resour. 2023 Nov 23;8(11):1301-1305. doi: 10.1080/23802359.2023.2284415. eCollection 2023.

引用本文的文献

1
The complete chloroplast genomes and phylogenetic analysis of var. from Northeast Asia.来自东北亚的变种的完整叶绿体基因组及系统发育分析。
Mitochondrial DNA B Resour. 2025 May 14;10(6):474-479. doi: 10.1080/23802359.2025.2503406. eCollection 2025.

本文引用的文献

1
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.RAxML 版本 8:用于系统发育分析和大型系统发育后分析的工具。
Bioinformatics. 2014 May 1;30(9):1312-3. doi: 10.1093/bioinformatics/btu033. Epub 2014 Jan 21.
2
Molecular phylogeny and genetic variation in the genus Lilium native to China based on the internal transcribed spacer sequences of nuclear ribosomal DNA.基于核核糖体 DNA 内转录间隔区序列的中国百合属的分子系统发育和遗传变异。
J Plant Res. 2014 Mar;127(2):249-63. doi: 10.1007/s10265-013-0600-4. Epub 2013 Nov 9.
3
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.
Geneious Basic:一个集成和可扩展的桌面软件平台,用于组织和分析序列数据。
Bioinformatics. 2012 Jun 15;28(12):1647-9. doi: 10.1093/bioinformatics/bts199. Epub 2012 Apr 27.
4
More genes or more taxa? The relative contribution of gene number and taxon number to phylogenetic accuracy.更多的基因还是更多的分类单元?基因数量和分类单元数量对系统发育准确性的相对贡献。
Mol Biol Evol. 2005 May;22(5):1337-44. doi: 10.1093/molbev/msi121. Epub 2005 Mar 2.
5
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform.MAFFT:一种基于快速傅里叶变换的快速多序列比对新方法。
Nucleic Acids Res. 2002 Jul 15;30(14):3059-66. doi: 10.1093/nar/gkf436.
6
A molecular phylogeny of Lilium in the internal transcribed spacer region of nuclear ribosomal DNA.基于核糖体DNA内部转录间隔区的百合属植物分子系统发育研究
J Mol Evol. 1999 Aug;49(2):238-49. doi: 10.1007/pl00006546.