Kundu Shantanu, Kumar Vikas, Laskar Boni Amin, Tyagi Kaomud, Chandra Kailash
Centre for DNA Taxonomy, Molecular Systematics Division, Zoological Survey of India, Kolkata, India.
Freshwater Biology Regional Centre (FBRC), Zoological Survey of India, Hyderabad, India.
Mitochondrial DNA B Resour. 2018 Apr 26;3(2):513-518. doi: 10.1080/23802359.2018.1467215.
Geoemydid turtles are one of the most imperilled fauna on the planet, with nearly half of them are threatened with extinction due to bushmeat crisis, traditional medicine, and the illegal pet trade. Classical taxonomy often fails to identify the pet-kept turtle specimens due to amorphous form, unusual shell colouration owing to poor storage in captivity or intensely tinted for high demanding value. The DNA barcoding technique has evidenced as a supportive tool for accurate species identification in systematics research and discerned the nameless taxa in forensic sciences. We tested the effectiveness of DNA barcoding tools for identifying the pet-kept Geoemydid turtle in northeast India. The 36 generated sequences are readily delineated into 12 Geoemydid species using molecular data. The overall mean genetic distance of the studied Geoemydid turtles dataset is 15.3% and ranges from 3.4% to 22.6% between the species. The NJ, ML and Bayesian phylogeny also resulted monophyletic clustering and discriminated all the studied species. The present study contributes DNA barcode sequences of Geoemydid turtles in the global database and also affirms the on-going illegal pet trade of highly threatened species in northeast India.
地龟科龟类是地球上最濒危的动物之一,其中近一半因野味危机、传统医药和非法宠物贸易而面临灭绝威胁。由于形态不规则、因圈养时保存不善导致壳色异常或因高需求价值而颜色过深,经典分类学常常无法识别作为宠物饲养的龟类标本。DNA条形码技术已被证明是系统学研究中准确物种鉴定的辅助工具,并在法医学中识别出无名分类群。我们测试了DNA条形码工具在识别印度东北部作为宠物饲养的地龟科龟类方面的有效性。利用分子数据,生成的36个序列很容易被划分为12种地龟科物种。所研究的地龟科龟类数据集的总体平均遗传距离为15.3%,物种之间的遗传距离在3.4%至22.6%之间。NJ、ML和贝叶斯系统发育分析也产生了单系聚类,并区分了所有研究的物种。本研究为全球数据库贡献了地龟科龟类的DNA条形码序列,也证实了印度东北部高度濒危物种正在进行的非法宠物贸易。