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巨蛤(双壳纲:砗磲科)的线粒体全基因组序列

The complete mitochondrial genome sequence of the giant clam (Tridacnidae: Tridacna).

作者信息

Ma Haitao, Lin Lin, Zhang Yuehuan, Chen Shixi, Shi Wei, Yu Ziniu

机构信息

Key Laboratory of Tropical Marine Bio-resources and Ecology, Guangdong Provincial Key Laboratory of Applied Marine Biology, South China Sea Institute of Oceanology, Chinese Academy of Sciences, Guangzhou, China.

South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Guangzhou, China.

出版信息

Mitochondrial DNA B Resour. 2018 Aug 13;3(2):911-912. doi: 10.1080/23802359.2018.1501290.

DOI:10.1080/23802359.2018.1501290
PMID:33474363
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7799873/
Abstract

The complete mitochondrial genome of the giant clam was completely sequenced by high-throughput sequencing method. The total length of the complete mitogenome was 20,760bp, including 13 protein-coding genes, 23 transfer RNA genes, 2 ribosomal RNA genes and a non-coding control region. The base composition of the genome is 28.41% A, 36.92% G, 21.94% G and 12.74% C with a total GC content of 34.68%. Phylogenetic tree based on complete mitogenome sequences revealed that was closely related to , both belonging to the genus.

摘要

通过高通量测序方法对巨蛤的完整线粒体基因组进行了全序列测定。完整线粒体基因组的总长度为20,760bp,包括13个蛋白质编码基因、23个转运RNA基因、2个核糖体RNA基因和一个非编码控制区。基因组的碱基组成为:A占28.41%,G占36.92%,G占21.94%,C占12.74%,GC总含量为34.68%。基于完整线粒体基因组序列构建的系统发育树表明,[物种名称1]与[物种名称2]密切相关,二者均属于[属名]属。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/806c/7799873/59fb62db514e/TMDN_A_1501290_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/806c/7799873/59fb62db514e/TMDN_A_1501290_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/806c/7799873/59fb62db514e/TMDN_A_1501290_F0001_B.jpg

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本文引用的文献

1
The complete mitogenome of the giant clam Tridacna squamosa (Heterodonta: Bivalvia: Tridacnidae).大砗磲(Tridacna squamosa)(异齿亚纲:双壳纲:砗磲科)的完整线粒体基因组。
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3220-1. doi: 10.3109/19401736.2015.1007355. Epub 2015 Feb 4.
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MEGA6: Molecular Evolutionary Genetics Analysis version 6.0.MEGA6:分子进化遗传学分析版本 6.0。
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