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鲿科鲶鱼(鲇形目:鲿科)的完整线粒体基因组

The complete mitogenome of Bagrid catfish (Siluriformes: Claroteidae).

作者信息

Kim Nack-Keun, Zealous Gietbong Fantong, Andriyono Sapto, Kim Ah Ran, Kim Hyun-Woo

机构信息

Interdisciplinary Program of Biomedical, Mechanical and Electrical Engineering, Pukyong National University, Busan, Republic of Korea.

Department of Marine Biology, Pukyong National University, Busan, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2018 Oct 25;3(2):1239-1240. doi: 10.1080/23802359.2018.1532341.

DOI:10.1080/23802359.2018.1532341
PMID:33474476
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800669/
Abstract

We here report the complete mitochondrial genome of , which is 16,514 bp in length. Mitogenome of showed the conserved 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and two noncoding regions including the light-strand replication origin (OL) and a putative control region (CR). All tRNA genes were predicted to fold into the typical cloverleaf secondary structures with the typical base-pairing except for tRNA-Ser(AGC). Phylogenetic analysis with currently known complete mitogenome sequences in Siluriformes showed that is most closely related to forming a family Claroteidae cluster.

摘要

我们在此报告了[物种名称]的完整线粒体基因组,其长度为16,514碱基对。[物种名称]的线粒体基因组显示出13个保守的蛋白质编码基因、22个tRNA基因、两个rRNA基因以及两个非编码区域,包括轻链复制起点(OL)和一个假定的控制区域(CR)。除了tRNA-Ser(AGC)外,所有tRNA基因均预测能折叠成具有典型碱基配对的典型三叶草二级结构。对鲶形目目前已知的完整线粒体基因组序列进行的系统发育分析表明,[物种名称]与[另一物种名称]关系最为密切,形成了一个Claroteidae科的聚类。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dd8/7800669/e24814be5e2a/TMDN_A_1532341_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dd8/7800669/e24814be5e2a/TMDN_A_1532341_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2dd8/7800669/e24814be5e2a/TMDN_A_1532341_F0001_B.jpg

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本文引用的文献

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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
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ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences.ARWEN:一个用于检测后生动物线粒体核苷酸序列中tRNA基因的程序。
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