• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于基因组的适应性效应分析以及与在……中获得含……、……和……质粒相关的补偿性变化

Genome-Based Analyses of Fitness Effects and Compensatory Changes Associated with Acquisition of -, -, and -Containing Plasmids in .

作者信息

Pietsch Michael, Pfeifer Yvonne, Fuchs Stephan, Werner Guido

机构信息

Robert Koch Institute, Department Infectious Diseases, Division Nosocomial Pathogens and Antimicrobial Resistances, Wernigerode Branch, 38855 Wernigerode, Germany.

Robert Koch Institute, Department Methodology and Research Infrastructure, Division Bioinformatics, 13353 Berlin, Germany.

出版信息

Antibiotics (Basel). 2021 Jan 19;10(1):90. doi: 10.3390/antibiotics10010090.

DOI:10.3390/antibiotics10010090
PMID:33477799
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7832316/
Abstract

(1) Background: Resistance plasmids are under selective conditions beneficial for the bacterial host, but in the absence of selective pressure, this carriage may cause fitness costs. Compensation of this fitness burden is important to obtain competitive ability under antibiotic-free conditions. In this study, we investigated fitness effects after a conjugative transfer of plasmids containing various beta-lactamase genes transferred into . (2) Methods: Fourteen beta-lactamase-encoding plasmids were transferred from clinical donor strains to J53. Growth rates were compared for all transconjugants and the recipient. Selected transconjugants were challenged in long-term growth experiments. Growth rates were assessed at different time points during growth for 500 generations. Whole-genome sequencing (WGS) of initial and evolved transconjugants was determined. Results: Most plasmid acquisitions resulted in growth differences, ranging from -4.5% to 7.2%. Transfer of a single -carrying plasmid resulted in a growth burden and a growth benefit in independent mating. Long-term growth led to a compensation of fitness burdens and benefits. Analyzing WGS revealed genomic changes caused by Single Nucleotide Polymorphisms (SNPs) and insertion sequences over time. Conclusions: Fitness effects associated with plasmid acquisitions were variable. Potential compensatory mutations identified in transconjugants' genomes after 500 generations give interesting insights into aspects of plasmid-host adaptations.

摘要

(1) 背景:耐药质粒在有利于细菌宿主的选择条件下存在,但在没有选择压力时,这种携带可能会导致适应性代价。在无抗生素条件下获得竞争能力,补偿这种适应性负担很重要。在本研究中,我们调查了含有各种β-内酰胺酶基因的质粒接合转移到……后对适应性的影响。(2) 方法:将14种编码β-内酰胺酶的质粒从临床供体菌株转移到J53。比较了所有转接合子和受体的生长速率。在长期生长实验中对选定的转接合子进行挑战。在500代生长过程中的不同时间点评估生长速率。对初始和进化后的转接合子进行全基因组测序(WGS)。结果:大多数质粒获得导致生长差异,范围从-4.5%到7.2%。单个携带……的质粒转移在独立交配中导致生长负担和生长益处。长期生长导致适应性负担和益处得到补偿。分析WGS揭示了随着时间推移由单核苷酸多态性(SNP)和插入序列引起的基因组变化。结论:与质粒获得相关的适应性影响是可变的。在500代后在转接合子基因组中鉴定出的潜在补偿性突变,为质粒-宿主适应性的各个方面提供了有趣的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edba/7832316/2adaeb6a5a9d/antibiotics-10-00090-g004a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edba/7832316/0e98a34bf3ab/antibiotics-10-00090-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edba/7832316/ab45001b6ddf/antibiotics-10-00090-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edba/7832316/97b939ed46af/antibiotics-10-00090-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edba/7832316/2adaeb6a5a9d/antibiotics-10-00090-g004a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edba/7832316/0e98a34bf3ab/antibiotics-10-00090-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edba/7832316/ab45001b6ddf/antibiotics-10-00090-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edba/7832316/97b939ed46af/antibiotics-10-00090-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/edba/7832316/2adaeb6a5a9d/antibiotics-10-00090-g004a.jpg

相似文献

1
Genome-Based Analyses of Fitness Effects and Compensatory Changes Associated with Acquisition of -, -, and -Containing Plasmids in .基于基因组的适应性效应分析以及与在……中获得含……、……和……质粒相关的补偿性变化
Antibiotics (Basel). 2021 Jan 19;10(1):90. doi: 10.3390/antibiotics10010090.
2
Competition between Escherichia coli Populations with and without Plasmids Carrying a Gene Encoding Extended-Spectrum Beta-Lactamase in the Broiler Chicken Gut.携带有编码扩展谱β-内酰胺酶基因的质粒的大肠杆菌种群与不带质粒的大肠杆菌种群在肉鸡肠道中的竞争。
Appl Environ Microbiol. 2019 Aug 14;85(17). doi: 10.1128/AEM.00892-19. Print 2019 Sep 1.
3
Advantage of the F2:A1:B- IncF Pandemic Plasmid over IncC Plasmids in Acquisition and Evolution of Gene-Bearing Plasmids in Escherichia coli.F2:A1:B- IncF 大流行质粒相较于 IncC 质粒在大肠杆菌中获得和进化携带基因质粒的优势。
Antimicrob Agents Chemother. 2019 Sep 23;63(10). doi: 10.1128/AAC.01130-19. Print 2019 Oct.
4
Prevalence of Cefotaxime-Resistant Escherichia coli Isolates from Healthy Cattle and Sheep in Northern Spain: Phenotypic and Genome-Based Characterization of Antimicrobial Susceptibility.西班牙北部健康牛和羊中产头孢噻肟耐药大肠杆菌的流行情况:基于表型和基因组对抗菌药物敏感性的特征描述。
Appl Environ Microbiol. 2020 Jul 20;86(15). doi: 10.1128/AEM.00742-20.
5
IncI1 plasmids carrying bla(CTX-M-1) or bla(CMY-2) genes in Escherichia coli from healthy humans and animals in Tunisia.来自突尼斯健康人和动物的大肠杆菌中携带bla(CTX-M-1)或bla(CMY-2)基因的IncI1质粒。
Microb Drug Resist. 2014 Oct;20(5):495-500. doi: 10.1089/mdr.2013.0224. Epub 2014 May 14.
6
Fecal Carriage of Extended-Spectrum-β-Lactamase/AmpC-Producing in Horses.马中产超广谱β-内酰胺酶/头孢菌素酶的粪便携带情况。
Appl Environ Microbiol. 2020 Apr 1;86(8). doi: 10.1128/AEM.02590-19.
7
Underlying mechanisms of carbapenem resistance in extended-spectrum β-lactamase-producing Klebsiella pneumoniae and Escherichia coli isolates at a tertiary care centre in Lebanon: role of OXA-48 and NDM-1 carbapenemases.黎巴嫩一家三级保健中心产超广谱β-内酰胺酶肺炎克雷伯菌和大肠埃希菌分离株碳青霉烯类耐药的潜在机制:OXA-48 和 NDM-1 碳青霉烯酶的作用。
Int J Antimicrob Agents. 2013 Jan;41(1):75-9. doi: 10.1016/j.ijantimicag.2012.08.010. Epub 2012 Nov 9.
8
Increased detection of extended spectrum beta-lactamase producing Salmonella enterica and Escherichia coli isolates from poultry.从家禽中检测到更多的产超广谱β-内酰胺酶的沙门氏菌和大肠杆菌分离株。
Vet Microbiol. 2010 Oct 26;145(3-4):273-8. doi: 10.1016/j.vetmic.2010.03.019. Epub 2010 Mar 27.
9
High prevalence of CTX-M-15 and first report of CTX-M-3, CTX-M-22, CTX-M-28 and plasmid-mediated AmpC beta-lactamase producing Enterobacteriaceae causing urinary tract infections in Bosnia and Herzegovina in hospital and community settings.CTX-M-15的高流行率以及CTX-M-3、CTX-M-22、CTX-M-28和质粒介导的AmpCβ-内酰胺酶产生肠杆菌科细菌在波斯尼亚和黑塞哥维那医院和社区环境中引起尿路感染的首次报告。
J Infect Chemother. 2015 May;21(5):363-9. doi: 10.1016/j.jiac.2015.01.003. Epub 2015 Jan 9.
10
Occurrence of OXA-48 Carbapenemase and Other β-Lactamase Genes in ESBL-Producing Multidrug Resistant Escherichia coli from Dogs and Cats in the United States, 2009-2013.2009 - 2013年美国犬猫产超广谱β-内酰胺酶的多重耐药大肠埃希菌中OXA - 48碳青霉烯酶及其他β-内酰胺酶基因的出现情况
Front Microbiol. 2016 Jul 11;7:1057. doi: 10.3389/fmicb.2016.01057. eCollection 2016.

引用本文的文献

1
Dissemination of IncI plasmid encoding is not hampered by its fitness cost in the pig's gut.携带 IncI 质粒的传播不受其在猪肠道中的适应性代价的阻碍。
Antimicrob Agents Chemother. 2023 Oct 18;67(10):e0011123. doi: 10.1128/aac.00111-23. Epub 2023 Sep 13.
2
Risk factors for third-generation cephalosporin-resistant and extended-spectrum β-lactamase-producing Escherichia coli carriage in domestic animals of semirural parishes east of Quito, Ecuador.厄瓜多尔基多以东半农村教区家畜中耐第三代头孢菌素和产超广谱β-内酰胺酶大肠杆菌携带的危险因素。
PLOS Glob Public Health. 2022 Mar 23;2(3):e0000206. doi: 10.1371/journal.pgph.0000206. eCollection 2022.
3

本文引用的文献

1
ResFinder 4.0 for predictions of phenotypes from genotypes.ResFinder 4.0 用于基因型到表型的预测。
J Antimicrob Chemother. 2020 Dec 1;75(12):3491-3500. doi: 10.1093/jac/dkaa345.
2
The Role of Integrative and Conjugative Elements in Antibiotic Resistance Evolution.整合子和接合性质粒在抗生素耐药性进化中的作用。
Trends Microbiol. 2021 Jan;29(1):8-18. doi: 10.1016/j.tim.2020.05.011. Epub 2020 Jun 11.
3
Escherichia coli CFT073 Fitness Factors during Urinary Tract Infection: Identification Using an Ordered Transposon Library.
Transfer dynamics of multi-resistance plasmids in Escherichia coli isolated from meat.
从肉类中分离的大肠杆菌中多重耐药质粒的转移动力学。
PLoS One. 2022 Jul 7;17(7):e0270205. doi: 10.1371/journal.pone.0270205. eCollection 2022.
4
Large-Scale Analysis of Fitness Cost of (X4)-Positive Plasmids in .大规模分析 (X4)-阳性质粒在. 中的适应性代价。
Front Cell Infect Microbiol. 2022 Jun 3;12:798802. doi: 10.3389/fcimb.2022.798802. eCollection 2022.
5
Identification of CTX-M Type ESBL from Sheep and Their Abattoir Environment Using Whole-Genome Sequencing.利用全基因组测序技术从绵羊及其屠宰场环境中鉴定CTX-M型超广谱β-内酰胺酶
Pathogens. 2021 Nov 14;10(11):1480. doi: 10.3390/pathogens10111480.
6
Directed Recovery and Molecular Characterization of Antibiotic Resistance Plasmids from Cheese Bacteria.从奶酪细菌中定向回收和分子特征分析抗生素抗性质粒。
Int J Mol Sci. 2021 Jul 21;22(15):7801. doi: 10.3390/ijms22157801.
7
Role played by the environment in the emergence and spread of antimicrobial resistance (AMR) through the food chain.环境在抗菌药物耐药性(AMR)通过食物链出现和传播过程中所起的作用。
EFSA J. 2021 Jun 17;19(6):e06651. doi: 10.2903/j.efsa.2021.6651. eCollection 2021 Jun.
大肠杆菌 CFT073 在尿路感染期间的适应因子:利用有序转座子文库进行鉴定。
Appl Environ Microbiol. 2020 Jun 17;86(13). doi: 10.1128/AEM.00691-20.
4
Acquired AmpC β-Lactamases among from Healthy Humans and Animals, Food, Aquatic and Trout Aquaculture Environments in Portugal.葡萄牙健康人类、动物、食物、水生环境及鳟鱼养殖环境中的获得性AmpC β-内酰胺酶
Pathogens. 2020 Apr 9;9(4):273. doi: 10.3390/pathogens9040273.
5
Epidemiology of β-Lactamase-Producing Pathogens.产β-内酰胺酶病原体的流行病学。
Clin Microbiol Rev. 2020 Feb 26;33(2). doi: 10.1128/CMR.00047-19. Print 2020 Mar 18.
6
Intraclonal competitive fitness of longitudinal cystic fibrosis Pseudomonas aeruginosa airway isolates in liquid cultures.纵向囊性纤维化铜绿假单胞菌气道分离株在液体培养中的克隆内竞争适应性。
Environ Microbiol. 2020 Jul;22(7):2536-2549. doi: 10.1111/1462-2920.14924. Epub 2020 Feb 7.
7
Infections caused by extended-spectrum β-lactamase-producing Enterobacterales after rectal colonization with ESBL-producing Escherichia coli or Klebsiella pneumoniae.产超广谱β-内酰胺酶肠杆菌科细菌经产 ESBL 大肠埃希菌或肺炎克雷伯菌直肠定植后的感染。
Clin Microbiol Infect. 2020 Aug;26(8):1046-1051. doi: 10.1016/j.cmi.2019.11.025. Epub 2019 Dec 3.
8
Detection of VIM-1-Producing Enterobacter cloacae and Salmonella enterica Serovars Infantis and Goldcoast at a Breeding Pig Farm in Germany in 2017 and Their Molecular Relationship to Former VIM-1-Producing Infantis Isolates in German Livestock Production.2017 年德国一家种猪场中产 VIM-1 肠杆菌科和肠炎沙门氏菌婴儿血清型和金海岸的检测及其与德国畜牧业中先前产 VIM-1 婴儿分离株的分子关系。
mSphere. 2019 Jun 12;4(3):e00089-19. doi: 10.1128/mSphere.00089-19.
9
Rapid Increase in Carbapenemase-Producing Enterobacteriaceae in Retail Meat Driven by the Spread of the -Carrying IncX3 Plasmid in China from 2016 to 2018.2016 年至 2018 年,中国携带 - 碳青霉烯酶基因 IncX3 质粒的碳青霉烯酶产生肠杆菌科在零售肉中的快速传播。
Antimicrob Agents Chemother. 2019 Jul 25;63(8). doi: 10.1128/AAC.00573-19. Print 2019 Aug.
10
The Arginine Deiminase Operon Is Responsible for a Fitness Trade-Off in Extended-Spectrum-β-Lactamase-Producing Strains of Escherichia coli.精氨酸脱亚氨酶操纵子导致产超广谱β-内酰胺酶大肠杆菌的适应性权衡。
Antimicrob Agents Chemother. 2019 Jul 25;63(8). doi: 10.1128/AAC.00635-19. Print 2019 Aug.