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新热带鹿物种中的卫星 DNA

Satellite DNA in Neotropical Deer Species.

机构信息

Department of Genetics and Reproductive Biotechnologies, Central European Institute of Technology-Veterinary Research Institute, Hudcova 70, 621 00 Brno, Czech Republic.

Institute of Vertebrate Biology, Czech Academy of Sciences, Kvetna 8, 603 65 Brno, Czech Republic.

出版信息

Genes (Basel). 2021 Jan 19;12(1):123. doi: 10.3390/genes12010123.

Abstract

The taxonomy and phylogenetics of Neotropical deer have been mostly based on morphological criteria and needs a critical revision on the basis of new molecular and cytogenetic markers. In this study, we used the variation in the sequence, copy number, and chromosome localization of satellite I-IV DNA to evaluate evolutionary relationships among eight Neotropical deer species. Using FISH with satI-IV probes derived from , we proved the presence of satellite DNA blocks in peri/centromeric regions of all analyzed deer. Satellite DNA was also detected in the interstitial chromosome regions of species of the genus with highly reduced chromosome numbers. In contrast to , , and , species showed high abundance of satIV DNA by FISH. The phylogenetic analysis of the satellite DNA showed close relationships between and Furthermore, the Neotropical and Nearctic populations of formed a single clade. However, the satellite DNA phylogeny did not allow resolving the relationships within the genus . The high abundance of the satellite DNA in centromeres probably contributes to the formation of chromosomal rearrangements, thus leading to a fast and ongoing speciation in this genus, which has not yet been reflected in the satellite DNA sequence diversification.

摘要

新热带鹿的分类和系统发生学主要基于形态学标准,需要基于新的分子和细胞遗传学标记进行批判性修订。在这项研究中,我们使用卫星 I-IV DNA 序列、拷贝数和染色体定位的变异来评估 8 种新热带鹿物种之间的进化关系。使用源自 的 satI-IV 探针进行 FISH,我们证明了所有分析的鹿种的着丝粒/近着丝粒区域存在卫星 DNA 块。在染色体数目高度减少的属的种间的染色体间区域也检测到了卫星 DNA。与 、 和 不同, 种通过 FISH 显示出 satIV DNA 的高丰度。卫星 DNA 的系统发育分析表明 和 之间存在密切关系。此外,新热带和近北极的 种群形成了一个单一的分支。然而,卫星 DNA 系统发育并不能解决属内的关系。卫星 DNA 在着丝粒中的高丰度可能有助于染色体重排的形成,从而导致该属的快速和持续的物种形成,这尚未反映在卫星 DNA 序列多样化中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f22c/7835801/340900839b7f/genes-12-00123-g001.jpg

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