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大麦的完整线粒体基因组。

The complete mitochondrial genome of barley.

作者信息

Wang Yu Lin, Wei Ze Xiu, Xu Qi Jun, Zeng Xing Quan, Yuan Hong Jun, Tang Ya Wei, Tashi Nyima

机构信息

Tibet Academy of Agricultural and Animal Husbandry Sciences, Lhasa, Tibet, China.

Barley Improvement and Yak Breeding Key Laboratory, Lhasa, Tibet, China.

出版信息

Mitochondrial DNA B Resour. 2016 Jul 6;1(1):430-431. doi: 10.1080/23802359.2016.1180553.

DOI:10.1080/23802359.2016.1180553
PMID:33490399
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800387/
Abstract

Hulless barley ( L. var. ) is one of the staple foods for Tibetans and an important livestock feed in the Tibetan Plateau. We report the complete mitochondrial genome of barely. The complete mitochondrial genome size is 416,675 bp. Hulless barely mitochondrial genome encode 34 protein-coding genes, 19 tRNA genes and three rRNA genes. The mitochondrial genome has 50 forward and palindrome repeats totally. Nucleotide sequence of coding region takes over 13.60%, GC content is 44.33%. The maximum-likelihood (ML) phylogenetic tree based on 11 protein-coding genes common to seven plant mitochondrial genomes using as out-group support that hulless barely is close to species.

摘要

青稞(L. var.)是藏族的主食之一,也是青藏高原重要的牲畜饲料。我们报道了青稞完整的线粒体基因组。完整的线粒体基因组大小为416,675 bp。青稞线粒体基因组编码34个蛋白质编码基因、19个tRNA基因和3个rRNA基因。线粒体基因组共有50个正向和回文重复序列。编码区核苷酸序列占比超过13.60%,GC含量为44.33%。基于七个植物线粒体基因组共有的11个蛋白质编码基因构建的最大似然(ML)系统发育树,以 作为外类群,支持青稞与 物种相近。

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本文引用的文献

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The complete chloroplast genome of Tibetan hulless barley.西藏青稞的完整叶绿体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2017 May;28(3):324-325. doi: 10.3109/19401736.2015.1122765. Epub 2015 Dec 29.
2
The draft genome of Tibetan hulless barley reveals adaptive patterns to the high stressful Tibetan Plateau.青稞基因组草图揭示了其对高应激性青藏高原的适应模式。
Proc Natl Acad Sci U S A. 2015 Jan 27;112(4):1095-100. doi: 10.1073/pnas.1423628112. Epub 2015 Jan 12.
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