• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于RNA测序组装的红尾鳅完整线粒体转录本(硬骨鱼纲:鳅科)

The complete mitochondrial transcript of the red tail loach as assembled from RNAseq (Teleostei: Botiidae).

作者信息

Grau José Horacio, Hilgers Leon, Altmüller Janine, Šlechtová Vendula, Bohlen Jörg

机构信息

Museum für Naturkunde Berlin, Leibniz-Institut für Evolutions- und Biodiversitätsforschung, Berlin, Germany.

Cologne Center for Genomics (CCG), Universität zu Köln, Köln, Germany.

出版信息

Mitochondrial DNA B Resour. 2017 Feb 2;2(1):46-47. doi: 10.1080/23802359.2016.1275851.

DOI:10.1080/23802359.2016.1275851
PMID:33490436
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7800403/
Abstract

Here, we present the first complete mitochondrial genome of the Red Tailed Loach (Teleostei: Botiidae) from Thailand, assembled from next-generation transcriptome sequencing data. The assembled transcript corresponds to the full length mitochondrial genome of , which measured 16,865 bp in length, and contained 13 protein-coding genes, 2 ribosomal RNA genes, and 22 transfer RNA genes. A slight A + T bias was observed in the mitogenome of with an overall base composition of 32.2% A, 25.8% T, 26.4% C, and 15.4% G, and a GC content of 41.8%. The gene arrangement was identical to that of previously described loach mitogenomes.

摘要

在此,我们展示了来自泰国的红尾鳅(硬骨鱼纲:鳅科)的首个完整线粒体基因组,该基因组由下一代转录组测序数据组装而成。组装得到的转录本对应于 的全长线粒体基因组,其长度为16,865 bp,包含13个蛋白质编码基因、2个核糖体RNA基因和22个转运RNA基因。在 的线粒体基因组中观察到轻微的A+T偏好,总体碱基组成为32.2%A、25.8%T、26.4%C和15.4%G,GC含量为41.8%。基因排列与先前描述的鳅线粒体基因组相同。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b931/7800403/65a3ab4d3f5d/TMDN_A_1275851_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b931/7800403/65a3ab4d3f5d/TMDN_A_1275851_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b931/7800403/65a3ab4d3f5d/TMDN_A_1275851_F0001_B.jpg

相似文献

1
The complete mitochondrial transcript of the red tail loach as assembled from RNAseq (Teleostei: Botiidae).基于RNA测序组装的红尾鳅完整线粒体转录本(硬骨鱼纲:鳅科)
Mitochondrial DNA B Resour. 2017 Feb 2;2(1):46-47. doi: 10.1080/23802359.2016.1275851.
2
The complete mitochondrial genome of the Jaguar Loach ().豹纹鳅的完整线粒体基因组( )。 (原文括号处内容缺失,翻译可能不太完整准确)
Mitochondrial DNA B Resour. 2021 May 23;6(6):1737-1739. doi: 10.1080/23802359.2021.1924090.
3
Characterization and phylogenetic analysis of the complete mitochondrial genome of sun loach ().太阳泥鳅线粒体全基因组的特征分析与系统发育分析()。 (注:原文括号处内容缺失)
Mitochondrial DNA B Resour. 2021 Jan 5;6(1):13-14. doi: 10.1080/23802359.2020.1842263.
4
The complete mitochondrial genome of Taiwanese spined loach Cobitis cf. sinensis (Teleostei: Cobitidae).台湾中华花鳅(Cobitis cf. sinensis)(硬骨鱼纲:鳅科)的线粒体全基因组
Mitochondrial DNA. 2015;26(6):832-3. doi: 10.3109/19401736.2013.855915. Epub 2014 Jan 10.
5
The complete mitochondrial genome of the lesser sac-winged bat (Chiroptera: Emballonuridae) from Costa Rica.来自哥斯达黎加的小囊翼蝠(翼手目:鞘尾蝠科)的完整线粒体基因组。
Mitochondrial DNA B Resour. 2017 Apr 21;2(1):234-235. doi: 10.1080/23802359.2017.1318679.
6
The complete mitochondrial genome of a cave-dwelling loach (Teleostei: Nemacheilidae).一种洞穴泥鳅(硬骨鱼纲:条鳅科)的完整线粒体基因组。
Mitochondrial DNA B Resour. 2021 Mar 26;6(3):1209-1211. doi: 10.1080/23802359.2021.1899861.
7
Complete mitochondrial genome of (Squamata: Scincidae).(有鳞目:石龙子科)的完整线粒体基因组。
Mitochondrial DNA B Resour. 2020 Jan 16;5(1):676-677. doi: 10.1080/23802359.2020.1713919.
8
The complete mitogenome of Japanese swallow angelfish (Genicanthus semifasciatus) and Ornate angelfish (Genicanthus bellus) (Teleostei: Pomacanthidae).日本燕子神仙鱼(半带盖刺鱼)和华丽神仙鱼(美丽盖刺鱼)(硬骨鱼纲:棘蝶鱼科)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Jul;27(4):2627-8. doi: 10.3109/19401736.2015.1041126. Epub 2015 May 29.
9
Complete mitochondrial DNA genome of Triplophysa venusta (Cypriniformes: Cobitida).细尾高原鳅(鲤形目:鳅科)的完整线粒体DNA基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Nov;27(6):4617-4619. doi: 10.3109/19401736.2015.1101584. Epub 2015 Dec 18.
10
Complete mitochondrial genome of Taiwanese loach, ssp. (Cobitinae).台湾泥鳅(亚种)(鳅科)的完整线粒体基因组
Mitochondrial DNA B Resour. 2018 Mar 13;3(1):340-341. doi: 10.1080/23802359.2018.1450665.

引用本文的文献

1
The complete mitochondrial genome and phylogenetic analysis of (Blyth, 1860) (Cypriniformes: Botiidae).(1860年,布莱思)(鲤形目:野鲮科)的线粒体全基因组及系统发育分析
Mitochondrial DNA B Resour. 2025 Apr 8;10(5):376-381. doi: 10.1080/23802359.2025.2487064. eCollection 2025.
2
The complete mitochondrial genome of the Jaguar Loach ().豹纹鳅的完整线粒体基因组( )。 (原文括号处内容缺失,翻译可能不太完整准确)
Mitochondrial DNA B Resour. 2021 May 23;6(6):1737-1739. doi: 10.1080/23802359.2021.1924090.

本文引用的文献

1
The complete mitochondrial genome of Ambastaia sidthimunki (Cypriniformes: Cobitidae).斯氏纹胸鮡(鲤形目:鳅科)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3228-9. doi: 10.3109/19401736.2015.1007359. Epub 2015 Feb 27.
2
CLUH regulates mitochondrial biogenesis by binding mRNAs of nuclear-encoded mitochondrial proteins.CLUH通过结合核编码线粒体蛋白的mRNA来调节线粒体生物发生。
J Cell Biol. 2014 Oct 27;207(2):213-23. doi: 10.1083/jcb.201403129.
3
SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads.
SOAPdenovo-Trans:基于短 RNA-Seq 数据的 de novo 转录组组装。
Bioinformatics. 2014 Jun 15;30(12):1660-6. doi: 10.1093/bioinformatics/btu077. Epub 2014 Feb 13.
4
MITOS: improved de novo metazoan mitochondrial genome annotation.MITOS:改进的从头后生动物线粒体基因组注释。
Mol Phylogenet Evol. 2013 Nov;69(2):313-9. doi: 10.1016/j.ympev.2012.08.023. Epub 2012 Sep 7.
5
The complete mitochondrial genome sequence of Triplophysa bleekeri (Teleostei, Balitoridae, Nemacheilinae).贝氏高原鳅(硬骨鱼纲,平鳍鳅科,条鳅亚科)线粒体全基因组序列
Mitochondrial DNA. 2013 Feb;24(1):25-7. doi: 10.3109/19401736.2012.716050. Epub 2012 Sep 5.
6
The complete mitogenome sequence of a cave loach Triplophysa rosa (Teleostei, Balitoridae, Nemacheilinae).洞穴条鳅(Triplophysa rosa)(硬骨鱼纲,爬鳅科,条鳅亚科)的完整线粒体基因组序列
Mitochondrial DNA. 2012 Oct;23(5):366-8. doi: 10.3109/19401736.2012.696628. Epub 2012 Jul 9.
7
New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0.新算法和方法估计最大似然系统发育:评估 PhyML 3.0 的性能。
Syst Biol. 2010 May;59(3):307-21. doi: 10.1093/sysbio/syq010. Epub 2010 Mar 29.
8
Molecular phylogeny of the Southeast Asian freshwater fish family Botiidae (Teleostei: Cobitoidea) and the origin of polyploidy in their evolution.东南亚淡水鱼科野鲮科(硬骨鱼纲:鳅超科)的分子系统发育及其进化过程中多倍体的起源
Mol Phylogenet Evol. 2006 May;39(2):529-41. doi: 10.1016/j.ympev.2005.09.018. Epub 2005 Dec 6.
9
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis.从多序列比对中选择保守区域用于系统发育分析。
Mol Biol Evol. 2000 Apr;17(4):540-52. doi: 10.1093/oxfordjournals.molbev.a026334.