Faculty of Medical Sciences, Biosciences Institute, Newcastle University, Newcastle upon Tyne, NE2 4HH, United Kingdom.
School of Natural and Environmental Sciences, Newcastle University, Newcastle upon Tyne, NE1 7RU, United Kingdom.
FEMS Microbiol Ecol. 2021 Jan 26;97(2). doi: 10.1093/femsec/fiaa249.
One of the current aims of synthetic biology is the development of novel microorganisms that can mine economically important elements from the environment or remediate toxic waste compounds. Copper, in particular, is a high-priority target for bioremediation owing to its extensive use in the food, metal and electronic industries and its resulting common presence as an environmental pollutant. Even though microbe-aided copper biomining is a mature technology, its application to waste treatment and remediation of contaminated sites still requires further research and development. Crucially, any engineered copper-remediating chassis must survive in copper-rich environments and adapt to copper toxicity; they also require bespoke adaptations to specifically extract copper and safely accumulate it as a human-recoverable deposit to enable biorecycling. Here, we review current strategies in copper bioremediation, biomining and biorecycling, as well as strategies that extant bacteria use to enhance copper tolerance, accumulation and mineralization in the native environment. By describing the existing toolbox of copper homeostasis proteins from naturally occurring bacteria, we show how these modular systems can be exploited through synthetic biology to enhance the properties of engineered microbes for biotechnological copper recovery applications.
合成生物学的当前目标之一是开发新型微生物,使其能够从环境中提取具有经济价值的元素或修复有毒废物化合物。铜由于在食品、金属和电子工业中的广泛应用及其作为环境污染物的常见存在,是生物修复的一个高度优先目标。尽管微生物辅助的铜生物浸出是一项成熟的技术,但将其应用于废物处理和污染场地的修复仍需要进一步的研究和开发。至关重要的是,任何经过工程改造的铜修复底盘都必须在富含铜的环境中生存并适应铜毒性;它们还需要专门的适应措施来特异性地提取铜并安全地将其积累为人类可回收的沉积物,以实现生物再循环。在这里,我们回顾了当前的铜生物修复、生物浸出和生物再循环策略,以及现存细菌在自然环境中增强铜耐受性、积累和矿化的策略。通过描述来自天然细菌的铜稳态蛋白的现有工具包,我们展示了如何通过合成生物学利用这些模块化系统来增强工程微生物的特性,以用于生物技术铜回收应用。