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评价一种多重 PCR 方法,用于检测各种现场样本中的猪细小病毒 1 至 7 型。

Evaluation of a multiplex PCR method for the detection of porcine parvovirus types 1 through 7 using various field samples.

机构信息

College of Veterinary Medicine, Jeonbuk National University, Iksan, Korea.

The Pirbright Institute, Pirbright, United Kingdom.

出版信息

PLoS One. 2021 Jan 28;16(1):e0245699. doi: 10.1371/journal.pone.0245699. eCollection 2021.

Abstract

Porcine parvoviruses (PPVs) are small, nonenveloped DNA viruses that are widespread in the global pig population. PPV type 1 (PPV1) is a major causative agent of reproductive failure and has been recognized since the 1960s. In recent decades, novel PPVs have been identified and designated as PPVs 2 through 7 (PPV2PPV7). Although the epidemiological impacts of these newly recognized parvoviruses on pigs are largely unknown, continuous surveillance of these PPVs is needed. The aim of this study was to develop an improved and efficient detection tool for these PPVs and to assess the developed method with field samples. Using 7 sets of newly designed primers, a multiplex polymerase chain reaction (mPCR) protocol was developed for the simultaneous detection of the seven genotypes of PPV (PPV1PPV7). The sensitivity of the mPCR assay was analyzed, and the detection limit was determined to be 3×103 viral copies. The assay was highly specific in detecting one or more of the viruses in various combinations in specimens. The mPCR method was evaluated with 80 serum samples, 40 lung or lymph node samples and 40 intestine or fecal samples. When applied to these samples, the mPCR method could detect the 7 viruses simultaneously, providing rapid results regarding infection and coinfection status. In conclusion, the developed mPCR assay can be utilized as an effective and accurate diagnostic tool for rapid differential detection and epidemiological surveillance of various PPVs in numerous types of field samples.

摘要

猪细小病毒(PPV)是一种小型无包膜 DNA 病毒,广泛存在于全球猪群中。PPV 1 型(PPV1)是导致繁殖失败的主要病原体,自 20 世纪 60 年代以来就已经被认识。近几十年来,已经鉴定出了新型的 PPV,并将其命名为 PPV2 至 7 型(PPV2PPV7)。尽管这些新发现的细小病毒对猪的流行病学影响在很大程度上尚不清楚,但仍需要对这些 PPV 进行持续监测。本研究旨在开发一种改进和有效的检测这些 PPV 的工具,并使用现场样本评估该方法。本研究使用 7 组新设计的引物,开发了一种多重聚合酶链反应(mPCR)方案,用于同时检测七种基因型的 PPV(PPV1PPV7)。分析了 mPCR 检测方法的敏感性,确定其检测下限为 3×103 个病毒拷贝。该检测方法在检测各种组合的一种或多种病毒时具有高度特异性。mPCR 方法对 80 份血清样本、40 份肺或淋巴结样本和 40 份肠或粪便样本进行了评估。当应用于这些样本时,mPCR 方法可以同时检测到 7 种病毒,快速提供感染和混合感染状态的结果。总之,该开发的 mPCR 检测方法可作为一种有效且准确的诊断工具,用于快速鉴别检测和对多种类型的现场样本中各种 PPV 进行流行病学监测。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b3db/7842984/fe6abd23c818/pone.0245699.g001.jpg

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