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生物膜中能力基因表达的空间相关性与分布

Spatial Correlations and Distribution of Competence Gene Expression in Biofilms of .

作者信息

Ishkov Ivan P, Kaspar Justin R, Hagen Stephen J

机构信息

Department of Physics, University of Florida, Gainesville, FL, United States.

Department of Oral Biology, College of Dentistry, University of Florida, Gainesville, FL, United States.

出版信息

Front Microbiol. 2021 Jan 12;11:627992. doi: 10.3389/fmicb.2020.627992. eCollection 2020.

Abstract

is an important pathogen in the human oral biofilm. It expresses virulent behaviors that are linked to its genetic competence regulon, which is controlled by . Expression of is modulated by two diffusible signaling peptides, denoted CSP and XIP, and by other environmental cues such as pH and oxidative stress. The sensitivity of competence to environmental inputs that may vary on microscopic length scales raises the question of whether the biofilm environment creates microniches where competence and related phenotypes are concentrated, leading to spatial clustering of virulence behaviors. We have used two-photon microscopy to characterize the spatial distribution of expression among individual cells in biofilms. By analyzing correlations in activity, we test for spatial clustering that may suggest localized competence microenvironments. Our data indicate that both competence-signaling peptides diffuse efficiently through the biofilm. XIP elicits a population-wide response. CSP triggers a Poisson-like, spatially random response from a subpopulation of cells that is homogeneously dispersed. Our data indicate that competence microenvironments if they exist are small enough that the phenotypes of individual cells are not clustered or correlated to any greater extent than occurs in planktonic cultures.

摘要

是人类口腔生物膜中的一种重要病原体。它表达的毒力行为与其遗传感受态调节子有关,该调节子由 控制。 的表达受两种可扩散信号肽(称为CSP和XIP)以及其他环境线索(如pH值和氧化应激)的调节。感受态对可能在微观长度尺度上变化的环境输入的敏感性,引发了生物膜环境是否会形成微环境,使感受态和相关表型集中,从而导致毒力行为的空间聚集的问题。我们使用双光子显微镜来表征生物膜中单个 细胞之间 表达的空间分布。通过分析 活性的相关性,我们测试可能表明局部感受态微环境的空间聚集。我们的数据表明,两种感受态信号肽都能有效地在生物膜中扩散。XIP引发全群体反应。CSP从均匀分散的细胞亚群中触发类似泊松分布的、空间随机的 反应。我们的数据表明,如果存在感受态微环境,其规模小到单个细胞的表型不会比浮游培养中出现的情况有更大程度的聚集或相关性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f5a/7835332/e81f3b390217/fmicb-11-627992-g001.jpg

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