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环境触发因素在……中的表达

Environmental Triggers of Expression in .

作者信息

Ishkov Ivan P, Ahn Sang-Joon, Rice Kelly C, Hagen Stephen J

机构信息

Department of Physics, University of Florida, Gainesville, FL, United States.

Department of Oral Biology, College of Dentistry, University of Florida, Gainesville, FL, United States.

出版信息

Front Microbiol. 2020 Jan 28;11:18. doi: 10.3389/fmicb.2020.00018. eCollection 2020.

Abstract

The and operons of encode proteins that are structurally similar to the bacteriophage lambda family of holin-antiholin proteins, which are believed to facilitate cell death in other bacterial species. Although their precise function is not known, and are linked to multiple virulence traits of , including oxidative stress tolerance, biofilm formation, and autolysis. Here we investigate the regulation of which in shows a complex dependence on growth conditions that is not fully understood. By combining single-cell imaging of a fluorescent gene reporter with microfluidic control of the extracellular environment, we identify specific environmental cues that trigger expression and characterize cell-to-cell heterogeneity in activity. We find that the very abrupt activation of at stationary phase is tightly synchronized across the population. This activation is controlled by a small number of inputs that are sensitive to growth phase: extracellular pyruvate, glucose, and molecular oxygen. Activation of appears to be self-limiting, so that strong expression of is confined to a short interval of time. is programmed to switch on briefly at the end of exponential growth, as glucose and molecular oxygen are exhausted and extracellular pyruvate is available. Our findings are consistent with studies of other bacteria showing that homologs of participate, with input from , in the reimport of pyruvate for anaerobic fermentative growth.

摘要

编码的和操纵子所产生的蛋白质在结构上类似于噬菌体λ家族的孔蛋白 - 抗孔蛋白,据信这些蛋白有助于其他细菌物种的细胞死亡。尽管它们的确切功能尚不清楚,但和与的多种毒力特性有关,包括氧化应激耐受性、生物膜形成和自溶作用。在这里,我们研究了在中表现出对生长条件的复杂依赖性且尚未完全理解的的调控机制。通过将荧光基因报告基因的单细胞成像与细胞外环境的微流控控制相结合,我们确定了触发表达的特定环境线索,并表征了活性中的细胞间异质性。我们发现,在稳定期的非常突然的激活在整个群体中是紧密同步的。这种激活由少数对生长阶段敏感的输入控制:细胞外丙酮酸、葡萄糖和分子氧。的激活似乎是自我限制的,因此的强表达仅限于短时间间隔。被编程为在指数生长结束时短暂开启,此时葡萄糖和分子氧耗尽且细胞外丙酮酸可用。我们的发现与其他细菌的研究一致,表明的同源物参与了在的输入下,丙酮酸用于厌氧发酵生长的重新输入过程。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/99f0/6997555/fce36c8dee45/fmicb-11-00018-g001.jpg

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